FFCP PHASE1:Hg19::chr3:23958612..23958630,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:23958612..23958630,+ to FFCP PHASE1:Hg19::chr3:23958612..23958630,+: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6138 | |EntrezGene=6138 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10306 | |HGNC=10306 | ||
|TSSclassifier=strong | |||
|UniProt=P61313,Q642I1 | |UniProt=P61313,Q642I1 | ||
|association_with_transcript=0bp_to_ENST00000413699,ENST00000456530,NM_001253383_5end | |||
|cluster_id=chr3:23958612..23958630,+ | |||
|coexpression_cluster_id=C447 | |||
|description=CAGE_peak_1_at_RPL15_5end | |||
|id=chr3:23958612..23958630,+ | |||
|ontology_enrichment_celltype=CL:0000012!9.15e-44!682;CL:0000548!3.29e-43!679;CL:0000004!3.29e-43!679;CL:0000255!3.29e-43!679;CL:0000144!3.42e-34!625;CL:0002371!7.66e-28!591;CL:0000003!1.10e-27!722;CL:0002321!5.81e-25!248;CL:0000220!9.56e-25!246;CL:0000055!2.99e-18!180;CL:0000222!9.05e-18!119;CL:0000393!3.04e-15!60;CL:0000211!3.04e-15!60;CL:0000183!3.05e-15!59;CL:0000680!2.05e-14!57;CL:0000056!2.05e-14!57;CL:0000355!2.05e-14!57;CL:0000187!4.91e-14!54;CL:0000063!1.32e-13!578;CL:0000066!4.88e-13!254;CL:0000192!2.89e-12!42;CL:0000514!2.89e-12!42;CL:0000359!1.38e-09!32;CL:0000221!1.01e-07!71;CL:0000034!2.68e-07!444;CL:0000723!8.43e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.88e-09;32!CL:0000192;3.66e-08;43!CL:0000187;4.77e-08;55!CL:0000393;2.06e-07;61!CL:0000211;2.06e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.99e-25,250;CL:0000222,7.57e-18,121;CL:0000393,1.03e-14,61;CL:0000211,1.03e-14,61;CL:0000680,6.85e-14,58;CL:0000056,6.85e-14,58;CL:0000355,6.85e-14,58;CL:0000187,1.68e-13,55;CL:0000066,3.10e-13,253;CL:0000192,1.07e-11,43;CL:0000514,1.07e-11,43;CL:0000359,1.38e-09,32;CL:0000221,8.23e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000514;3.66e-08;43!CL:0000355;8.45e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.89e-15!83;UBERON:0002329!2.89e-15!83;UBERON:0003077!2.89e-15!83;UBERON:0003059!2.89e-15!83;UBERON:0007282!2.89e-15!83;UBERON:0009618!2.89e-15!83;UBERON:0007285!2.89e-15!83;UBERON:0004290!1.07e-14!70;UBERON:0000486!1.10e-14!82;UBERON:0005256!8.01e-12!143;UBERON:0000490!1.83e-11!138;UBERON:0001134!1.87e-11!61;UBERON:0002036!1.87e-11!61;UBERON:0003082!1.87e-11!61;UBERON:0002049!2.70e-11!79;UBERON:0007798!2.70e-11!79;UBERON:0001637!7.23e-11!42;UBERON:0003509!7.23e-11!42;UBERON:0004572!7.23e-11!42;UBERON:0001981!2.46e-10!60;UBERON:0007500!2.46e-10!60;UBERON:0004537!2.46e-10!60;UBERON:0006965!2.46e-10!60;UBERON:0002385!3.19e-10!63;UBERON:0001015!3.19e-10!63;UBERON:0000383!3.19e-10!63;UBERON:0003914!6.66e-10!118;UBERON:0000055!1.21e-09!69;UBERON:0004872!2.34e-09!84;UBERON:0003104!1.08e-07!238;UBERON:0009142!1.08e-07!238;UBERON:0002100!1.26e-07!216;UBERON:0000119!2.15e-07!312;UBERON:0004573!4.23e-07!33;UBERON:0004571!4.23e-07!33;UBERON:0000483!7.39e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;4.29e-08;74!UBERON:0001637;4.58e-08;42!UBERON:0003509;4.58e-08;42!UBERON:0004572;4.58e-08;42!UBERON:0007500;6.02e-08;56!UBERON:0001981;6.02e-08;56!UBERON:0004537;6.02e-08;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,3.00e-16,78;UBERON:0000486,2.86e-14,83;UBERON:0002329,3.11e-14,71;UBERON:0003059,3.11e-14,71;UBERON:0007282,3.11e-14,71;UBERON:0004290,3.11e-14,71;UBERON:0009618,3.11e-14,71;UBERON:0000490,6.56e-14,148;UBERON:0003077,8.61e-14,72;UBERON:0007285,8.61e-14,72;UBERON:0007524,1.39e-13,73;UBERON:0002049,1.49e-11,78;UBERON:0007798,1.49e-11,78;UBERON:0001134,4.93e-11,62;UBERON:0002036,4.93e-11,62;UBERON:0003082,4.93e-11,62;UBERON:0001637,7.23e-11,42;UBERON:0003509,7.23e-11,42;UBERON:0004572,7.23e-11,42;UBERON:0007500,1.25e-10,59;UBERON:0001981,1.25e-10,59;UBERON:0004537,1.25e-10,59;UBERON:0006965,1.25e-10,59;UBERON:0003914,3.71e-10,117;UBERON:0000055,6.80e-10,68;UBERON:0002385,7.59e-10,64;UBERON:0001015,7.59e-10,64;UBERON:0000383,7.59e-10,64;UBERON:0004872,1.44e-09,83;UBERON:0005256,4.38e-09,122;UBERON:0000119,9.01e-08,309;UBERON:0003104,1.27e-07,160;UBERON:0009142,1.27e-07,160;UBERON:0002100,2.31e-07,199;UBERON:0000483,3.23e-07,306;UBERON:0004573,4.23e-07,33;UBERON:0004571,4.23e-07,33 | |||
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| ||
|short_description=p1@RPL15 | |||
}} | }} |
Latest revision as of 19:47, 17 September 2015
Short description: | p1@RPL15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPL15_5end |
Coexpression cluster: | C447_Alveolar_Bronchial_Smooth_Renal_Tracheal_Keratocytes_Hepatic |
Association with transcript: | 0bp_to_ENST00000413699, ENST00000456530, NM_001253383_5end |
EntrezGene: | RPL15 |
HGNC: | 10306 |
UniProt: | P61313Q642I1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.99e-25 | 250 |
mesodermal cell | 7.57e-18 | 121 |
electrically responsive cell | 1.03e-14 | 61 |
electrically active cell | 1.03e-14 | 61 |
muscle precursor cell | 6.85e-14 | 58 |
myoblast | 6.85e-14 | 58 |
multi-potent skeletal muscle stem cell | 6.85e-14 | 58 |
muscle cell | 1.68e-13 | 55 |
epithelial cell | 3.10e-13 | 253 |
smooth muscle cell | 1.07e-11 | 43 |
smooth muscle myoblast | 1.07e-11 | 43 |
vascular associated smooth muscle cell | 1.38e-09 | 32 |
ectodermal cell | 8.23e-08 | 72 |