FFCP PHASE1:Hg19::chr12:21791552..21791567,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:21791552..21791567,-
|short_description=p7@LDHB
|description=CAGE_peak_7_at_LDHB_5end
|association_with_transcript=-80bp_to_ENST00000470985_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3945 | |EntrezGene=3945 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6541 | |HGNC=6541 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-80bp_to_ENST00000470985_5end | |||
|cluster_id=chr12:21791552..21791567,- | |||
|coexpression_cluster_id=C125 | |||
|description=CAGE_peak_7_at_LDHB_5end | |||
|id=chr12:21791552..21791567,- | |||
|ontology_enrichment_celltype=CL:0000136!9.75e-14!15;CL:0000990!7.22e-09!8;CL:0000451!3.43e-07!10;CL:0000325!8.59e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.54e-22;13!CL:0000319;8.95e-20;1!CL:0000159;1.43e-10;2!CL:0002521;2.40e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,8.95e-20,1;CL:0000136,1.20e-19,15;CL:0000159,1.43e-10,2;CL:0002521,2.32e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.06e-19;1!UBERON:0001041;5.93e-10;30 | |||
|ontology_enrichment_disease=DOID:114!1.16e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3030;8.95e-20;1!DOID:4556;3.06e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,8.95e-20,1;DOID:4556,3.16e-07,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;2.40e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,2.32e-07,3 | |||
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| ||
|short_description=p7@LDHB | |||
}} | }} |
Latest revision as of 19:57, 17 September 2015
Short description: | p7@LDHB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LDHB_5end |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | -80bp_to_ENST00000470985_5end |
EntrezGene: | LDHB |
HGNC: | 6541 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 8.95e-20 | 1 |
fat cell | 1.20e-19 | 15 |
seromucus secreting cell | 1.43e-10 | 2 |
subcutaneous fat cell | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 2.32e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 8.95e-20 | 1 |
lung large cell carcinoma | 3.16e-07 | 3 |