FFCP PHASE1:Hg19::chr3:28333332..28333352,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152100 | |EntrezGene=152100 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28783 | |HGNC=28783 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000495428_5end | |association_with_transcript=0bp_to_ENST00000495428_5end | ||
|cluster_id=chr3:28333332..28333352,+ | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_2_at_CMC1_5end | |description=CAGE_peak_2_at_CMC1_5end | ||
|id=chr3:28333332..28333352,+ | |id=chr3:28333332..28333352,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.31e-22!140;CL:0000791!9.23e-21!18;CL:0000789!9.23e-21!18;CL:0002420!9.23e-21!18;CL:0002419!9.23e-21!18;CL:0000790!9.23e-21!18;CL:0000625!6.56e-19!11;CL:0002087!1.24e-15!119;CL:0000084!2.33e-15!25;CL:0000827!2.33e-15!25;CL:0000037!6.01e-15!172;CL:0000566!6.01e-15!172;CL:0000988!3.25e-13!182;CL:0002032!3.60e-12!165;CL:0000837!3.60e-12!165;CL:0002031!8.82e-12!124;CL:0000838!2.56e-11!52;CL:0000542!5.71e-11!53;CL:0000051!5.71e-11!53;CL:0000094!1.48e-09!8;CL:0000766!2.41e-07!76 | |ontology_enrichment_celltype=CL:0000738!2.31e-22!140;CL:0000791!9.23e-21!18;CL:0000789!9.23e-21!18;CL:0002420!9.23e-21!18;CL:0002419!9.23e-21!18;CL:0000790!9.23e-21!18;CL:0000625!6.56e-19!11;CL:0002087!1.24e-15!119;CL:0000084!2.33e-15!25;CL:0000827!2.33e-15!25;CL:0000037!6.01e-15!172;CL:0000566!6.01e-15!172;CL:0000988!3.25e-13!182;CL:0002032!3.60e-12!165;CL:0000837!3.60e-12!165;CL:0002031!8.82e-12!124;CL:0000838!2.56e-11!52;CL:0000542!5.71e-11!53;CL:0000051!5.71e-11!53;CL:0000094!1.48e-09!8;CL:0000766!2.41e-07!76 | ||
|ontology_enrichment_celltype_v019=CL:0000625;3.94e-33;11!CL:0000791;2.11e-26;18!CL:0000789;2.11e-26;18!CL:0002419;2.11e-26;18!CL:0000084;8.94e-21;25!CL:0000094;1.42e-12;8!CL:0000767;4.36e-10;3!CL:0000623;5.78e-10;3!CL:0000226;3.18e-09;3!CL:0000842;3.18e-09;3!CL:0002087;3.58e-09;104!CL:0000784;4.71e-09;3!CL:0000081;6.14e-09;11!CL:0002619;1.25e-08;3!CL:0000542;2.18e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,4.08e-33,11;CL:0000738,6.55e-29,136;CL:0000791,1.87e-26,18;CL:0000789,1.87e-26,18;CL:0002420,1.87e-26,18;CL:0002419,1.87e-26,18;CL:0000790,1.87e-26,18;CL:0000037,2.90e-21,168;CL:0000084,7.61e-21,25;CL:0000827,7.61e-21,25;CL:0002087,1.00e-20,115;CL:0000988,1.29e-19,177;CL:0002032,1.84e-16,161;CL:0000837,1.84e-16,161;CL:0002031,1.62e-15,120;CL:0000838,2.84e-14,52;CL:0000542,6.50e-14,53;CL:0000051,6.50e-14,53;CL:0000094,1.39e-12,8;CL:0000767,4.30e-10,3;CL:0000623,5.62e-10,3;CL:0000825,5.62e-10,3;CL:0000766,1.19e-09,72;CL:0000226,3.09e-09,3;CL:0000842,3.09e-09,3;CL:0000784,4.85e-09,3;CL:0000081,6.06e-09,11;CL:0002619,1.67e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;2.11e-26;18!CL:0000051;2.18e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.98e-17!115;UBERON:0000178!2.53e-14!15;UBERON:0000179!2.53e-14!15;UBERON:0000463!2.53e-14!15;UBERON:0002390!2.77e-11!102;UBERON:0003061!2.77e-11!102;UBERON:0002193!6.24e-11!112;UBERON:0004177!1.76e-07!7 | |ontology_enrichment_uberon=UBERON:0007023!5.98e-17!115;UBERON:0000178!2.53e-14!15;UBERON:0000179!2.53e-14!15;UBERON:0000463!2.53e-14!15;UBERON:0002390!2.77e-11!102;UBERON:0003061!2.77e-11!102;UBERON:0002193!6.24e-11!112;UBERON:0004177!1.76e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.22e-26;15!UBERON:0000179;9.22e-26;15!UBERON:0000463;9.22e-26;15!UBERON:0002390;5.34e-14;32!UBERON:0002193;4.44e-10;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.36e-26,15;UBERON:0000179,8.36e-26,15;UBERON:0000463,8.36e-26,15;UBERON:0002193,1.86e-17,108;UBERON:0002390,3.94e-17,98;UBERON:0003061,3.94e-17,98 | |||
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| ||
|short_description=p2@CMC1 | |short_description=p2@CMC1 | ||
}} | }} |
Latest revision as of 21:28, 17 September 2015
Short description: | p2@CMC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CMC1_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | 0bp_to_ENST00000495428_5end |
EntrezGene: | CMC1 |
HGNC: | 28783 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 4.08e-33 | 11 |
leukocyte | 6.55e-29 | 136 |
mature alpha-beta T cell | 1.87e-26 | 18 |
alpha-beta T cell | 1.87e-26 | 18 |
immature T cell | 1.87e-26 | 18 |
mature T cell | 1.87e-26 | 18 |
immature alpha-beta T cell | 1.87e-26 | 18 |
hematopoietic stem cell | 2.90e-21 | 168 |
T cell | 7.61e-21 | 25 |
pro-T cell | 7.61e-21 | 25 |
nongranular leukocyte | 1.00e-20 | 115 |
hematopoietic cell | 1.29e-19 | 177 |
hematopoietic oligopotent progenitor cell | 1.84e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.84e-16 | 161 |
hematopoietic lineage restricted progenitor cell | 1.62e-15 | 120 |
lymphoid lineage restricted progenitor cell | 2.84e-14 | 52 |
lymphocyte | 6.50e-14 | 53 |
common lymphoid progenitor | 6.50e-14 | 53 |
granulocyte | 1.39e-12 | 8 |
basophil | 4.30e-10 | 3 |
natural killer cell | 5.62e-10 | 3 |
pro-NK cell | 5.62e-10 | 3 |
myeloid leukocyte | 1.19e-09 | 72 |
single nucleate cell | 3.09e-09 | 3 |
mononuclear cell | 3.09e-09 | 3 |
plasmacytoid dendritic cell | 4.85e-09 | 3 |
blood cell | 6.06e-09 | 11 |
adult endothelial progenitor cell | 1.67e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 8.36e-26 | 15 |
haemolymphatic fluid | 8.36e-26 | 15 |
organism substance | 8.36e-26 | 15 |
hemolymphoid system | 1.86e-17 | 108 |
hematopoietic system | 3.94e-17 | 98 |
blood island | 3.94e-17 | 98 |