FFCP PHASE1:Hg19::chr2:162930904..162930915,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:162930904..162930915,- to FFCP PHASE1:Hg19::chr2:162930904..162930915,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1803 | |EntrezGene=1803 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3009 | |HGNC=3009 | ||
|TSSclassifier=strong | |||
|UniProt=P27487 | |UniProt=P27487 | ||
|association_with_transcript=136bp_to_ENST00000360534,NM_001935,uc002ubz.2,uc010fpb.2_5end | |||
|cluster_id=chr2:162930904..162930915,- | |||
|description=CAGE_peak_12_at_DPP4_5end | |||
|id=chr2:162930904..162930915,- | |||
|ontology_enrichment_celltype=CL:0002494!2.04e-09!16;CL:0000055!1.70e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002494;3.94e-17;16!CL:0000148;1.56e-12;10!CL:0000569;2.13e-11;4!CL:0000134;2.66e-09;55!CL:0000048;3.63e-09;58!CL:0002567;5.32e-09;3!CL:0000784;6.50e-09;3!CL:0000147;1.29e-08;14!CL:0000723;1.46e-08;61!CL:0002582;4.91e-08;3!CL:0002504;9.69e-08;3!CL:1000279;9.69e-08;3!CL:1000280;9.69e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,4.12e-17,16;CL:0000148,1.33e-12,10;CL:0000541,1.33e-12,10;CL:0000569,1.76e-11,4;CL:0000011,1.76e-11,4;CL:0000784,5.95e-09,3;CL:0002567,6.62e-09,3;CL:0000147,1.15e-08,14;CL:0002582,5.45e-08,3;CL:0002504,1.42e-07,3;CL:1000279,1.42e-07,3;CL:1000280,1.42e-07,3;CL:0000333,1.44e-07,41;CL:0000048,2.72e-07,427;CL:0000680,4.37e-07,58;CL:0000056,4.37e-07,58;CL:0000355,4.37e-07,58;CL:0000723,5.26e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000011;2.13e-11;4 | |||
|ontology_enrichment_disease=DOID:2394!7.10e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.88e-25;14!DOID:120;9.17e-12;27!DOID:193;9.34e-11;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.47e-25,14;DOID:120,1.04e-11,27;DOID:193,1.05e-10,29 | |||
|ontology_enrichment_uberon=UBERON:0000948!9.50e-08!24;UBERON:0005498!9.50e-08!24;UBERON:0004140!9.50e-08!24;UBERON:0009881!9.50e-08!24;UBERON:0004141!9.50e-08!24;UBERON:0003084!9.50e-08!24;UBERON:0007005!9.50e-08!24;UBERON:0004139!9.50e-08!24;UBERON:0004291!9.50e-08!24;UBERON:0000992!5.13e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;1.84e-15;13!UBERON:0002118;8.59e-14;5!UBERON:0000948;8.81e-12;22!UBERON:0002119;4.02e-11;4!UBERON:0007100;4.45e-10;25!UBERON:0000991;7.47e-09;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,1.62e-15,13;UBERON:0002118,9.76e-14,5;UBERON:0002119,2.91e-11,4;UBERON:0000948,1.38e-10,24;UBERON:0005498,1.38e-10,24;UBERON:0004140,1.38e-10,24;UBERON:0009881,1.38e-10,24;UBERON:0004141,1.38e-10,24;UBERON:0003084,1.38e-10,24;UBERON:0007005,1.38e-10,24;UBERON:0004139,1.38e-10,24;UBERON:0004291,1.38e-10,24;UBERON:0007100,3.81e-09,27;UBERON:0000991,6.93e-09,21;UBERON:0009196,6.93e-09,21;UBERON:0009117,6.93e-09,21;UBERON:0005564,6.93e-09,21;UBERON:0004176,2.12e-08,22 | |||
|phase1_expression=0,0.214100523890983,0,0,0,1.74467704820074,0,0,0.261185628199839,0.245733936501509,0,0.218441372130172,0,0.618831764800233,0.662794751455832,2.01697543935533,0,0.730310090387373,0.975865597581014,0,0,0,0,0,0,0.382067028739756,0.164201178899891,0.393553906568396,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.393419540227666,0.786021525498329,0.411202997999018,0.83593247695339,0.32592226663359,0,0,0,0.294605907474837,0,0,0.768547918354051,0.780356085359269,2.13769275984779,2.21080014228679,0.289803085735052,0.14828656316206,0.535081656179426,0,0.679856056185397,0,0,0,0.318565414324097,0,0,0.301150238155546,0,0,0,0,0.403213486449465,0.534880391567015,0,2.43806866313962,1.34140171940727,0.383587685530591,0,0,0,0,0.486634870302636,0,0.221729397462564,0.263504357079378,0.0654895377488563,0,0,0.649094787309367,0.174129737299267,0.26591592103773,4.29283123749616,4.0039643754609,1.48583000531826,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.488124115096339,0.367663080345869,0,0.535798369704479,1.12264686313085,0.450445921933289,0,0,0,0,0,0,0,0.506522046658319,2.78059279707759,3.72887606973458,1.41867352879343,1.12135520028461,1.06748995729705,0.98667019366864,2.8008993185979,0,1.30769522490767,0,0,0,3.43376084513353,0,0.747243402759005,0.23486899728753,0.161872944368132,0,0,0,0,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0.300476117813194,0.567160915800105,0,0,1.27159140695737,0,0,0,0.18611685633159,0.168776332241266,0,0,0.368199594569197,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.368965315629341,0.171567810298526,0,0,0,0,0,2.07986957055916,0,0,0,0,0,0.570762456703795,0,0,0.492434012174795,0,0.297262324577456,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.75745460055828,2.79390734885544,2.29193055334967,3.51652341630141,3.4214489204541,1.85089486865982,4.20480280981484,3.14409075893636,0,0,0,0.646358578788889,0,1.690605505112,0,0,0,0,0,0.57191197463259,0,0.823240336780769,0,0.710783897485092,0,4.82303003295338,3.48613383440118,4.69873058555668,0,0.502257091432126,0,0,0,0,0.723906533337896,3.90405012845728,2.50685348535854,0.896681151948218,0.197030760201927,0.215627574859517,0.256686072559497,0.254094624222463,0,0,0,0,0,0,0.414415513436035,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.955719759148911,0,0,0,0,0,0.303127571446259,0,0,0,0,0.280660094433074,0.512556597022804,0,0,0,1.07946785661859,1.9531789784444,1.06765302817952,2.59627214591811,1.51073491997947,0.241718899183244,0,0,0.459257792658427,0.728364672026868,0.655622074797121,0.451199612907412,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.193341436584244,1.23238893691716,1.68854042198743,0.137836572484531,0.429680979473094,0.435050081742686,1.19317278382541,0,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0,0.286249773483982,0,0,1.33441135746677,0,0,0,0,1.43897966066652,1.09814811894422,1.17812402345686,0.606547444719948,0,1.68503382495592,0,3.89941583410055,0,0,1.69686518344455,0,0,0,1.31535265576129,0.578775534266688,0.655894752046633,0,0,0,0,0.294747123039363,0.35667105148125,0.354761064070598,1.89996871767898,0.329294892959902,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0.1605880751037,0.403599414382095,0,0,0.614481528616916,0,0,0,0,0,0,0,0,0,0.293016358543788,0.121360521749513,0,0,0.23874448473769,0.296964680832639,0,0,0.140669416410513,1.00177834520615,0.16480387422676,0,0,0.276283915531148,0.251932747854276,0.102268682502155,0.123084805461069,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0.583209226766509,0.173624994933292,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0.113942055847001,0,0,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.706765357169704,0,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,1.18375320854817,0,0,0.126373159256976,0.150323419414493,0,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0.195551382734803,0.0801588202515337,0,0.19980960958213,0.288180834308212,0.458146384663663,0.171594997861965,0,0,0,0,0,0,1.15580235960608,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0.0671834724867263,0.720599767084807,0,0.630265458457789,0.659326867049332,0.471824806979294,0,0.338693328263138,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,1.19403842309499,4.44055288709727,2.77402930751307,0.757612021100357,2.51567901752575,6.22867855117575,2.74608082076308,9.22508634955758,1.39893480524502,5.17493024963719,2.54874827461924,4.49803112163605,3.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| 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| ||
|short_description=p12@DPP4 | |||
}} | }} |
Latest revision as of 21:32, 17 September 2015
Short description: | p12@DPP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_DPP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 136bp_to_ENST00000360534, NM_001935, uc002ubz.2, uc010fpb.2_5end |
EntrezGene: | DPP4 |
HGNC: | 3009 |
UniProt: | P27487 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 4.12e-17 | 16 |
melanocyte | 1.33e-12 | 10 |
melanoblast | 1.33e-12 | 10 |
cardiac mesenchymal cell | 1.76e-11 | 4 |
migratory trunk neural crest cell | 1.76e-11 | 4 |
plasmacytoid dendritic cell | 5.95e-09 | 3 |
light melanocyte | 6.62e-09 | 3 |
pigment cell | 1.15e-08 | 14 |
visceral preadipocyte | 5.45e-08 | 3 |
enteric smooth muscle cell | 1.42e-07 | 3 |
smooth muscle cell of large intestine | 1.42e-07 | 3 |
smooth muscle cell of colon | 1.42e-07 | 3 |
migratory neural crest cell | 1.44e-07 | 41 |
multi fate stem cell | 2.72e-07 | 427 |
muscle precursor cell | 4.37e-07 | 58 |
myoblast | 4.37e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.37e-07 | 58 |
somatic stem cell | 5.26e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
female gonad | 1.62e-15 | 13 |
right ovary | 9.76e-14 | 5 |
left ovary | 2.91e-11 | 4 |
heart | 1.38e-10 | 24 |
primitive heart tube | 1.38e-10 | 24 |
primary heart field | 1.38e-10 | 24 |
anterior lateral plate mesoderm | 1.38e-10 | 24 |
heart tube | 1.38e-10 | 24 |
heart primordium | 1.38e-10 | 24 |
cardiac mesoderm | 1.38e-10 | 24 |
cardiogenic plate | 1.38e-10 | 24 |
heart rudiment | 1.38e-10 | 24 |
primary circulatory organ | 3.81e-09 | 27 |
gonad | 6.93e-09 | 21 |
indifferent external genitalia | 6.93e-09 | 21 |
indifferent gonad | 6.93e-09 | 21 |
gonad primordium | 6.93e-09 | 21 |
external genitalia | 2.12e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.47e-25 | 14 |
female reproductive organ cancer | 1.04e-11 | 27 |
reproductive organ cancer | 1.05e-10 | 29 |