FFCP PHASE1:Hg19::chr15:48442084..48442096,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50804 | |EntrezGene=50804 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17940 | |HGNC=17940 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=86bp_to_ENST00000558289,uc001zwg.3_5end | |association_with_transcript=86bp_to_ENST00000558289,uc001zwg.3_5end | ||
|cluster_id=chr15:48442084..48442096,- | |||
|coexpression_cluster_id=C373 | |||
|description=CAGE_peak_9_at_MYEF2_5end | |description=CAGE_peak_9_at_MYEF2_5end | ||
|id=chr15:48442084..48442096,- | |id=chr15:48442084..48442096,- | ||
|ontology_enrichment_celltype=CL:0000068!1.18e-17!3;CL:0000069!1.18e-17!3;CL:0000307!1.18e-17!3;CL:0000377!1.18e-17!3;CL:0002557!7.55e-14!1;CL:0002336!1.42e-13!1;CL:0002261!1.42e-13!1;CL:0002170!1.42e-13!1;CL:0002368!2.64e-09!13;CL:0002535!9.25e-08!2;CL:0002076!3.46e-07!43 | |ontology_enrichment_celltype=CL:0000068!1.18e-17!3;CL:0000069!1.18e-17!3;CL:0000307!1.18e-17!3;CL:0000377!1.18e-17!3;CL:0002557!7.55e-14!1;CL:0002336!1.42e-13!1;CL:0002261!1.42e-13!1;CL:0002170!1.42e-13!1;CL:0002368!2.64e-09!13;CL:0002535!9.25e-08!2;CL:0002076!3.46e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002535;3.61e-34;2!CL:0000307;3.66e-23;3!CL:0002202;1.16e-08;9!CL:0002632;1.16e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,3.61e-34,2;CL:0000068,4.09e-23,3;CL:0000069,4.09e-23,3;CL:0000307,4.09e-23,3;CL:0000377,4.09e-23,3;CL:0002202,1.21e-08,9;CL:0002632,1.21e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000377;3.66e-23;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4362;1.40e-14;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,1.40e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0007195!3.50e-14!1;UBERON:0003729!8.71e-11!5;UBERON:0003126!4.27e-08!7;UBERON:0001005!4.27e-08!7;UBERON:0006955!9.25e-08!2;UBERON:0004801!9.25e-08!2;UBERON:0007497!1.45e-07!2;UBERON:0003643!1.45e-07!2;UBERON:0003504!1.45e-07!2;UBERON:0003469!1.45e-07!2;UBERON:0003496!1.45e-07!2;UBERON:0004797!1.45e-07!2;UBERON:0002012!1.45e-07!2;UBERON:0008886!1.45e-07!2;UBERON:0007303!1.45e-07!2;UBERON:0002061!1.45e-07!2;UBERON:0005432!1.45e-07!2;UBERON:0004363!1.45e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0007195;3.34e-66;1!UBERON:0006955;3.61e-34;2!UBERON:0004801;3.61e-34;2!UBERON:0000002;2.19e-12;6!UBERON:0001560;2.19e-12;6!UBERON:0003126;9.43e-11;7!UBERON:0001005;9.43e-11;7!UBERON:0002371;8.14e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,2.39e-66,1;UBERON:0006955,3.61e-34,2;UBERON:0004801,3.61e-34,2;UBERON:0000002,2.19e-12,6;UBERON:0001560,2.19e-12,6;UBERON:0003126,9.89e-11,7;UBERON:0001005,9.89e-11,7 | |||
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|short_description=p9@MYEF2 | |short_description=p9@MYEF2 | ||
}} | }} |
Latest revision as of 21:40, 17 September 2015
Short description: | p9@MYEF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_MYEF2_5end |
Coexpression cluster: | C373_epidermoid_Prostate_cord_squamous_testicular_pharyngeal_testis |
Association with transcript: | 86bp_to_ENST00000558289, uc001zwg.3_5end |
EntrezGene: | MYEF2 |
HGNC: | 17940 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 3.61e-34 | 2 |
duct epithelial cell | 4.09e-23 | 3 |
branched duct epithelial cell | 4.09e-23 | 3 |
tracheal epithelial cell | 4.09e-23 | 3 |
tracheoblast | 4.09e-23 | 3 |
epithelial cell of tracheobronchial tree | 1.21e-08 | 9 |
epithelial cell of lower respiratory tract | 1.21e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 2.39e-66 | 1 |
uterine epithelium | 3.61e-34 | 2 |
cervix epithelium | 3.61e-34 | 2 |
uterine cervix | 2.19e-12 | 6 |
neck of organ | 2.19e-12 | 6 |
trachea | 9.89e-11 | 7 |
respiratory airway | 9.89e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 1.40e-14 | 5 |