FFCP PHASE1:Hg19::chr1:158985667..158985675,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3428 | |EntrezGene=3428 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5395 | |HGNC=5395 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=204bp_to_ENST00000474473_5end | |association_with_transcript=204bp_to_ENST00000474473_5end | ||
|cluster_id=chr1:158985667..158985675,+ | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_31_at_IFI16_5end | |description=CAGE_peak_31_at_IFI16_5end | ||
|id=chr1:158985667..158985675,+ | |id=chr1:158985667..158985675,+ | ||
|ontology_enrichment_celltype=CL:0002582!2.40e-08!3;CL:0002194!8.10e-08!63;CL:0000576!8.10e-08!63;CL:0000040!8.10e-08!63;CL:0000559!8.10e-08!63;CL:0002057!9.60e-08!42;CL:0000766!1.32e-07!76;CL:0002087!1.33e-07!119;CL:0000839!1.50e-07!70;CL:0002009!1.86e-07!65;CL:0000557!2.19e-07!71;CL:0000860!4.96e-07!45;CL:0002031!5.07e-07!124;CL:0000738!6.62e-07!140 | |ontology_enrichment_celltype=CL:0002582!2.40e-08!3;CL:0002194!8.10e-08!63;CL:0000576!8.10e-08!63;CL:0000040!8.10e-08!63;CL:0000559!8.10e-08!63;CL:0002057!9.60e-08!42;CL:0000766!1.32e-07!76;CL:0002087!1.33e-07!119;CL:0000839!1.50e-07!70;CL:0002009!1.86e-07!65;CL:0000557!2.19e-07!71;CL:0000860!4.96e-07!45;CL:0002031!5.07e-07!124;CL:0000738!6.62e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.82e-08;33!CL:0002057;2.82e-08;33 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;7.48e-30;1!DOID:4549;7.48e-30;1!DOID:5861;7.48e-30;1!DOID:6496;7.48e-30;1!DOID:1909;2.05e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,7.48e-30,1;DOID:4549,7.48e-30,1;DOID:5861,7.48e-30,1;DOID:6496,7.48e-30,1;DOID:1909,1.54e-15,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;6.73e-11;3!UBERON:0004755;6.73e-11;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,6.73e-11,3;UBERON:0004755,6.73e-11,3 | |||
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| ||
|short_description=p31@IFI16 | |short_description=p31@IFI16 | ||
}} | }} |
Latest revision as of 22:06, 17 September 2015
Short description: | p31@IFI16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_31_at_IFI16_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | 204bp_to_ENST00000474473_5end |
EntrezGene: | IFI16 |
HGNC: | 5395 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 6.73e-11 | 3 |
skeletal tissue | 6.73e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.48e-30 | 1 |
extraosseous chondrosarcoma | 7.48e-30 | 1 |
myxoid chondrosarcoma | 7.48e-30 | 1 |
extraskeletal myxoid chondrosarcoma | 7.48e-30 | 1 |
melanoma | 1.54e-15 | 2 |