FFCP PHASE1:Hg19::chr4:48018616..48018632,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1259 | |EntrezGene=1259 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2148 | |HGNC=2148 | ||
|TSSclassifier=strong | |||
|UniProt=Q08124 | |UniProt=Q08124 | ||
|association_with_transcript=-6bp_to_uc003gxv.1_5end | |association_with_transcript=-6bp_to_uc003gxv.1_5end | ||
|cluster_id=chr4:48018616..48018632,- | |||
|coexpression_cluster_id=C4420 | |||
|description=CAGE_peak_3_at_CNGA1_5end | |description=CAGE_peak_3_at_CNGA1_5end | ||
|id=chr4:48018616..48018632,- | |id=chr4:48018616..48018632,- | ||
|ontology_enrichment_celltype=CL:0000223!1.34e-08!59;CL:0000066!3.09e-08!254 | |ontology_enrichment_celltype=CL:0000223!1.34e-08!59;CL:0000066!3.09e-08!254 | ||
|ontology_enrichment_celltype_v019=CL:0002537;1.86e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.12e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!3.04e-10!14;DOID:305!1.37e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.13e-14!169;UBERON:0000925!1.13e-14!169;UBERON:0006595!1.13e-14!169;UBERON:0001007!4.63e-13!155;UBERON:0001555!4.63e-13!155;UBERON:0007026!4.63e-13!155;UBERON:0004921!1.62e-11!129;UBERON:0004185!1.62e-11!129;UBERON:0000161!3.46e-11!35;UBERON:0000344!2.54e-08!12;UBERON:0000077!3.43e-08!130;UBERON:0000166!3.68e-08!21;UBERON:0001046!2.60e-07!19;UBERON:0000165!3.48e-07!28;UBERON:0000930!3.48e-07!28;UBERON:0003929!5.96e-07!54;UBERON:0000922!7.54e-07!612 | |ontology_enrichment_uberon=UBERON:0004119!1.13e-14!169;UBERON:0000925!1.13e-14!169;UBERON:0006595!1.13e-14!169;UBERON:0001007!4.63e-13!155;UBERON:0001555!4.63e-13!155;UBERON:0007026!4.63e-13!155;UBERON:0004921!1.62e-11!129;UBERON:0004185!1.62e-11!129;UBERON:0000161!3.46e-11!35;UBERON:0000344!2.54e-08!12;UBERON:0000077!3.43e-08!130;UBERON:0000166!3.68e-08!21;UBERON:0001046!2.60e-07!19;UBERON:0000165!3.48e-07!28;UBERON:0000930!3.48e-07!28;UBERON:0003929!5.96e-07!54;UBERON:0000922!7.54e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0000305;7.17e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,6.22e-08,118;UBERON:0004119,1.72e-07,160;UBERON:0000925,1.72e-07,160;UBERON:0006595,1.72e-07,160;UBERON:0000305,7.86e-07,7 | |||
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| ||
|short_description=p3@CNGA1 | |short_description=p3@CNGA1 | ||
}} | }} |
Latest revision as of 22:21, 17 September 2015
Short description: | p3@CNGA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CNGA1_5end |
Coexpression cluster: | C4420_colon_Hepatocyte_placenta_mesothelioma_liver_lung_amniotic |
Association with transcript: | -6bp_to_uc003gxv.1_5end |
EntrezGene: | CNGA1 |
HGNC: | 2148 |
UniProt: | Q08124 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.12e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
subdivision of digestive tract | 6.22e-08 | 118 |
endoderm-derived structure | 1.72e-07 | 160 |
endoderm | 1.72e-07 | 160 |
presumptive endoderm | 1.72e-07 | 160 |
amnion | 7.86e-07 | 7 |