FFCP PHASE1:Hg19::chr13:73636334..73636351,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=688 | |EntrezGene=688 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6349 | |HGNC=6349 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-354bp_to_ENST00000464404_5end | |association_with_transcript=-354bp_to_ENST00000464404_5end | ||
|cluster_id=chr13:73636334..73636351,+ | |||
|description=CAGE_peak_6_at_KLF5_5end | |description=CAGE_peak_6_at_KLF5_5end | ||
|id=chr13:73636334..73636351,+ | |id=chr13:73636334..73636351,+ | ||
|ontology_enrichment_celltype=CL:0002623;3.87e-17;3!CL:0002251;9.36e-13;20!CL:0000622;1.73e-10;5!CL:0002076;2.33e-10;42!CL:0000154;8.11e-09;6!CL:0002328;4.88e-08;3 | |ontology_enrichment_celltype=CL:0002076!4.64e-17!43;CL:0000223!7.91e-14!59;CL:0000066!2.77e-13!254;CL:0002251!4.05e-09!21 | ||
| | |ontology_enrichment_celltype_v019=CL:0002623;3.87e-17;3!CL:0002251;9.36e-13;20!CL:0000622;1.73e-10;5!CL:0002076;2.33e-10;42!CL:0000154;8.11e-09;6!CL:0002328;4.88e-08;3 | ||
|ontology_enrichment_disease=DOID:3493;3.95e-12;2!DOID:1749;9.83e-10;14!DOID:3151;3.72e-07;1!DOID:3149;3.72e-07;1 | |ontology_enrichment_celltype_v019_2=CL:0002623,2.95e-17,3;CL:0002076,1.24e-13,42;CL:0002251,9.06e-13,20;CL:0000223,3.14e-11,58;CL:0000622,1.47e-10,5;CL:0000154,7.11e-09,6;CL:0002328,5.25e-08,3;CL:1001319,9.79e-07,1;CL:1000600,9.79e-07,1 | ||
|ontology_enrichment_uberon=UBERON:0000974;1.94e-15;6!UBERON:0000161;1.79e-13;19!UBERON:0000166;1.79e-13;19!UBERON:0003343;1.79e-13;4!UBERON:0004785;1.79e-13;4!UBERON:0000165;1.58e-11;28!UBERON:0001041;1.62e-09;14!UBERON:0001044;8.11e-09;6!UBERON:0003293;8.11e-09;6!UBERON:0003294;8.11e-09;6!UBERON:0010047;8.11e-09;6!UBERON:0003408;8.11e-09;6!UBERON:0000167;8.11e-09;6!UBERON:0002110;2.84e-08;3!UBERON:0004815;4.88e-08;3!UBERON:0002031;4.88e-08;3!UBERON:0004921;1.33e-07;33!UBERON:0002294;1.57e-07;7!UBERON:0001173;1.57e-07;7!UBERON:0000344;9.91e-07;20 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!5.85e-15!106;DOID:0050687!8.92e-13!143;DOID:299!1.93e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3493;3.95e-12;2!DOID:1749;9.83e-10;14!DOID:3151;3.72e-07;1!DOID:3149;3.72e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,5.23e-12,2;DOID:1749,6.77e-10,14;DOID:3151,4.18e-07,1;DOID:3149,4.18e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.22e-16!169;UBERON:0000925!1.22e-16!169;UBERON:0006595!1.22e-16!169;UBERON:0001007!2.29e-14!155;UBERON:0001555!2.29e-14!155;UBERON:0007026!2.29e-14!155;UBERON:0004921!3.67e-11!129;UBERON:0004185!3.67e-11!129;UBERON:0000344!1.20e-09!12;UBERON:0000077!3.49e-09!130;UBERON:0000161!1.68e-08!35;UBERON:0002294!3.15e-08!7;UBERON:0001173!3.15e-08!7;UBERON:0004912!3.15e-08!7;UBERON:0001004!1.60e-07!72;UBERON:0003729!2.55e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000974;1.94e-15;6!UBERON:0000161;1.79e-13;19!UBERON:0000166;1.79e-13;19!UBERON:0003343;1.79e-13;4!UBERON:0004785;1.79e-13;4!UBERON:0000165;1.58e-11;28!UBERON:0001041;1.62e-09;14!UBERON:0001044;8.11e-09;6!UBERON:0003293;8.11e-09;6!UBERON:0003294;8.11e-09;6!UBERON:0010047;8.11e-09;6!UBERON:0003408;8.11e-09;6!UBERON:0000167;8.11e-09;6!UBERON:0002110;2.84e-08;3!UBERON:0004815;4.88e-08;3!UBERON:0002031;4.88e-08;3!UBERON:0004921;1.33e-07;33!UBERON:0002294;1.57e-07;7!UBERON:0001173;1.57e-07;7!UBERON:0000344;9.91e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,5.57e-15,22;UBERON:0000161,1.45e-13,36;UBERON:0003343,1.59e-13,4;UBERON:0004785,1.59e-13,4;UBERON:0000165,4.56e-11,29;UBERON:0000930,4.56e-11,29;UBERON:0001007,1.61e-10,145;UBERON:0001555,1.61e-10,145;UBERON:0007026,1.61e-10,145;UBERON:0004119,2.86e-10,160;UBERON:0000925,2.86e-10,160;UBERON:0006595,2.86e-10,160;UBERON:0000974,2.62e-09,10;UBERON:0001044,7.11e-09,6;UBERON:0003293,7.11e-09,6;UBERON:0003294,7.11e-09,6;UBERON:0010047,7.11e-09,6;UBERON:0000167,7.11e-09,6;UBERON:0002110,2.74e-08,3;UBERON:0006242,2.74e-08,3;UBERON:0001004,3.19e-08,74;UBERON:0004815,5.25e-08,3;UBERON:0002031,5.25e-08,3;UBERON:0004921,4.97e-07,118;UBERON:0000997,8.75e-07,1;UBERON:0005056,8.75e-07,1;UBERON:0004645,9.79e-07,1;UBERON:0001256,9.79e-07,1;UBERON:0001259,9.79e-07,1 | |||
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| ||
|short_description=p6@KLF5 | |short_description=p6@KLF5 | ||
}} | }} |
Latest revision as of 22:35, 17 September 2015
Short description: | p6@KLF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_KLF5_5end |
Coexpression cluster: | NA |
Association with transcript: | -354bp_to_ENST00000464404_5end |
EntrezGene: | KLF5 |
HGNC: | 6349 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 2.95e-17 | 3 |
endo-epithelial cell | 1.24e-13 | 42 |
epithelial cell of alimentary canal | 9.06e-13 | 20 |
endodermal cell | 3.14e-11 | 58 |
acinar cell | 1.47e-10 | 5 |
protein secreting cell | 7.11e-09 | 6 |
bronchial epithelial cell | 5.25e-08 | 3 |
bladder cell | 9.79e-07 | 1 |
lower urinary tract cell | 9.79e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
oral opening | 5.57e-15 | 22 |
orifice | 1.45e-13 | 36 |
mucosa of oral region | 1.59e-13 | 4 |
respiratory system mucosa | 1.59e-13 | 4 |
mouth | 4.56e-11 | 29 |
stomodeum | 4.56e-11 | 29 |
digestive system | 1.61e-10 | 145 |
digestive tract | 1.61e-10 | 145 |
primitive gut | 1.61e-10 | 145 |
endoderm-derived structure | 2.86e-10 | 160 |
endoderm | 2.86e-10 | 160 |
presumptive endoderm | 2.86e-10 | 160 |
neck | 2.62e-09 | 10 |
saliva-secreting gland | 7.11e-09 | 6 |
gland of oral region | 7.11e-09 | 6 |
gland of foregut | 7.11e-09 | 6 |
oral gland | 7.11e-09 | 6 |
oral cavity | 7.11e-09 | 6 |
gallbladder | 2.74e-08 | 3 |
gall bladder primordium | 2.74e-08 | 3 |
respiratory system | 3.19e-08 | 74 |
lower respiratory tract epithelium | 5.25e-08 | 3 |
epithelium of bronchus | 5.25e-08 | 3 |
subdivision of digestive tract | 4.97e-07 | 118 |
mammalian vulva | 8.75e-07 | 1 |
external female genitalia | 8.75e-07 | 1 |
urinary bladder urothelium | 9.79e-07 | 1 |
wall of urinary bladder | 9.79e-07 | 1 |
mucosa of urinary bladder | 9.79e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 5.23e-12 | 2 |
squamous cell carcinoma | 6.77e-10 | 14 |
skin squamous cell carcinoma | 4.18e-07 | 1 |
keratoacanthoma | 4.18e-07 | 1 |