FFCP PHASE1:Hg19::chr2:166650594..166650630,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2591 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4125 | |||
|TSSclassifier=strong | |||
|UniProt=C9JW45 | |||
|association_with_transcript=126bp_to_ENST00000422973_5end | |||
|cluster_id=chr2:166650594..166650630,- | |||
|coexpression_cluster_id=C4141 | |||
|description=CAGE_peak_5_at_GALNT3_5end | |||
|id=chr2:166650594..166650630,- | |||
|ontology_enrichment_celltype=CL:0000066!1.39e-11!254;CL:0002076!7.80e-11!43;CL:0000223!1.81e-07!59;CL:0002251!4.50e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;8.43e-09;42!CL:0002166;5.07e-07;3!CL:0002541;6.36e-07;3!CL:0002621;6.81e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.45e-11,253;CL:0002076,6.58e-10,42;CL:0002166,4.84e-07,3;CL:0002621,5.35e-07,3;CL:0002541,7.46e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.25e-15!106;DOID:0050687!4.68e-10!143;DOID:1749!3.27e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:299;4.59e-10;25!DOID:1749;9.89e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.18e-14,106;DOID:299,4.73e-10,25;DOID:0050687,3.02e-09,143;DOID:1749,3.22e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.85e-19!169;UBERON:0000925!8.85e-19!169;UBERON:0006595!8.85e-19!169;UBERON:0001007!3.22e-17!155;UBERON:0001555!3.22e-17!155;UBERON:0007026!3.22e-17!155;UBERON:0001004!8.62e-14!72;UBERON:0004921!1.29e-11!129;UBERON:0004185!1.29e-11!129;UBERON:0000062!6.52e-11!511;UBERON:0000077!5.97e-10!130;UBERON:0000065!2.89e-09!53;UBERON:0000161!9.53e-09!35;UBERON:0008947!3.43e-08!38;UBERON:0003258!3.43e-08!38;UBERON:0000166!5.85e-07!21;UBERON:0005911!6.57e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002294;2.59e-07;7!UBERON:0001173;2.59e-07;7!UBERON:0004921;2.64e-07;33!UBERON:0003124;6.36e-07;3!UBERON:0000920;6.36e-07;3!UBERON:0001949;6.81e-07;3!UBERON:0005631;7.06e-07;10!UBERON:0000158;7.06e-07;10!UBERON:0002110;9.12e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.76e-12,160;UBERON:0000925,5.76e-12,160;UBERON:0006595,5.76e-12,160;UBERON:0001007,1.63e-10,145;UBERON:0001555,1.63e-10,145;UBERON:0007026,1.63e-10,145;UBERON:0001004,3.74e-09,74;UBERON:0004921,1.71e-07,118;UBERON:0000161,3.14e-07,36;UBERON:0000166,4.95e-07,22;UBERON:0001949,5.35e-07,3;UBERON:0000920,7.46e-07,3;UBERON:0002110,8.89e-07,3;UBERON:0006242,8.89e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,1.09220686065086,0.263766978228454,0.123766352960047,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0,0,0,0,0.383829398097213,0,0,0.90361775633475,0.369754010166788,0,0,0.293600439334847,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0.257575567634187,0.145398238779565,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0.199463657621632,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0.422510572623884,0,0.209658645508376,0,0.150176892841506,0.16072558669708,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0.111410456885174,0,0,0.270803863765016,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0.527008714158756,0.196468613246569,0.364295288292542,0.741568885568859,0,0,0,0.476981248610684,0,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0.436094052142534,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.245668634623536,0,0,0.247266929278557,0,0,0,0.125118519871964,0,0.438977620880838,0,0,0,0,0.213557388818567,0,0,0,0.257640540045629,0,0,0,0,0,0.161646056818812,0,0,0,2.89891279744945,3.00020732649918,2.58124135850103,2.43947412259191,2.51806559810822,1.74290914304278,0.621966330092223,2.27088765788066,4.37972830890996,0,0.643240938192885,0,0,0,0.709840800239063,1.34867752062481,0.964044119533928,0.882351781859152,0.871517776369625,0.949082476444386,0.404493924480493,0.784885860501384,0.38474715694639,0,0,0,0,0,0,0,0,1.59884970106048,0,1.20725313949488,0,1.00528972411631,0.740707561268237,0,0,0,0,0.469634776943287,0,0,0,0,1.71697232418975,0,0,0,2.81201501960331,10.9188383329259,2.26840155587818,1.43293636324557,1.74380363108377,0,0.985326475791887,0,1.24396869324463,1.15295962733569,0.37872730027914,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0.579125226670317,0,0,0.112085143993527,0,0,0.385029108839245,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,1.32945394550784,3.80962293576241,2.20994373446151,0,0,0.131124414959424,0.902399225814824,0.385076685522074,0.784349769176855,0,0.633309773357254,0,0,0,0,0.812839312631559,0,0.509752546090077,0,0.223874754722178,0,0,0,0,0.650756789328606,0.206082023295445,0.54941678891006,0.330037999682352,1.14853107599234,1.30012049207304,0,0,0,0,0,0,0,0,0,1.4875642382488,0.576570202095319,1.40373983744043,1.2138933702666,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0.865999014529609,0,0,0.753150406214233,0.86101074534246,0,0,2.29723400206959,0,0.764637207142375,0,0,0,0,0,0,0,0,1.47024129588619,0,0,0,0,0.199579371432817,0.383010740264733,0,0.324621940274555,0,0,0.47003968731907,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,0.222886768554957,0,4.53614521001611,0.593929361665277,7.37185685038157,0,0,0.222617410045812,0.16480387422676,0,0.19924798825107,1.38141957765574,0.503865495708552,0,0,0,0.898683511473268,3.9384658428634,0,0.295930216910801,0,0,0,0.0927680981618513,0,1.82299432759663,0.61221999997337,0.724999575434793,2.50345586228099,1.27126825146383,3.30942754475111,0,0,0,0,0,0,0.110579259931225,0,0,0,2.09135616417905,1.30815439456455,0.341826167541004,0.46112780877612,2.69272933229316,0.108647371922008,10.2080371114214,1.28236630762607,10.6606955203727,0,0.31396051279005,0,0,0,0,0,0,0,2.44849212238722,0.706765357169704,0.216388639742091,0.995261931078505,2.65372693510018,0.611030144933625,0,0,0,0.471807930864739,0,0.234264445725339,0,0.978323094660449,0,1.57833761139756,0,0.30607276163049,0.063186579628488,2.1045278718029,0.72581733978073,0,0,0,0,0.853828638089378,0,1.21491816834592,1.7638631534588,1.56706571844725,1.22308667769421,0,0,0,0,1.55182426381471,0,0.225980740780532,0,0,0,1.36885967914362,6.09207033911656,3.41524791582964,0,4.17862209746907,0,0,0.14405479798815,0,1.88555227693436,0,0,0,0,0,0,0,0,0,0,0,0,1.39775300349294,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,2.08979093004525,3.43848591493084,1.66176135211674,0.2249738915515,2.32140586367385,0.0607495566580247,1.67717343799633,1.26089131678717,0.262272940674991,0.105600336519406,0,1.34340638123612,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,2.81926008926669,1.28144895081234,2.82967749179399,0.828478110694391,0,0,0,1.91502377331055,0,0,0,0,2.51286554000375,0,0,0.1251909307065,0.573409195690071,0.332787154610557,0.248385611765534,0,0,0,0,0.235265819698172,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.267872740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| |||
|short_description=p5@GALNT3 | |||
}} |
Latest revision as of 23:50, 17 September 2015
Short description: | p5@GALNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GALNT3_5end |
Coexpression cluster: | C4141_Mallassezderived_Urothelial_papillotubular_large_Prostate_serous_Keratinocyte |
Association with transcript: | 126bp_to_ENST00000422973_5end |
EntrezGene: | GALNT3 |
HGNC: | 4125 |
UniProt: | C9JW45 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.45e-11 | 253 |
endo-epithelial cell | 6.58e-10 | 42 |
epithelial cell of Malassez | 4.84e-07 | 3 |
gingival epithelial cell | 5.35e-07 | 3 |
chorionic membrane mesenchymal stem cell | 7.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.76e-12 | 160 |
endoderm | 5.76e-12 | 160 |
presumptive endoderm | 5.76e-12 | 160 |
digestive system | 1.63e-10 | 145 |
digestive tract | 1.63e-10 | 145 |
primitive gut | 1.63e-10 | 145 |
respiratory system | 3.74e-09 | 74 |
subdivision of digestive tract | 1.71e-07 | 118 |
orifice | 3.14e-07 | 36 |
oral opening | 4.95e-07 | 22 |
gingival epithelium | 5.35e-07 | 3 |
egg chorion | 7.46e-07 | 3 |
gallbladder | 8.89e-07 | 3 |
gall bladder primordium | 8.89e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.18e-14 | 106 |
adenocarcinoma | 4.73e-10 | 25 |
cell type cancer | 3.02e-09 | 143 |
squamous cell carcinoma | 3.22e-09 | 14 |