FFCP PHASE1:Hg19::chr13:76391290..76391309,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4008 | |EntrezGene=4008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6646 | |HGNC=6646 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=368bp_to_ENST00000532785_5end | |association_with_transcript=368bp_to_ENST00000532785_5end | ||
|cluster_id=chr13:76391290..76391309,+ | |||
|coexpression_cluster_id=C3385 | |||
|description=CAGE_peak_16_at_LMO7_5end | |description=CAGE_peak_16_at_LMO7_5end | ||
|id=chr13:76391290..76391309,+ | |id=chr13:76391290..76391309,+ | ||
|ontology_enrichment_celltype=CL:0000057!5.56e-10!75;CL:0000055!7.44e-09!180 | |ontology_enrichment_celltype=CL:0000057!5.56e-10!75;CL:0000055!7.44e-09!180 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.83e-09;23!CL:0002580;3.80e-07;3!CL:0002579;4.58e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.79e-11,76;CL:0002620,3.36e-09,23;CL:0002580,3.38e-07,3;CL:0002579,3.73e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.00e-10;9!UBERON:0000042;2.00e-10;9!UBERON:0003688;9.55e-09;6!UBERON:0002358;9.55e-09;6!UBERON:0003684;9.55e-09;6!UBERON:0001178;9.55e-09;6!UBERON:0002097;5.60e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,6.62e-09,41;UBERON:0003688,8.41e-09,6;UBERON:0002358,8.41e-09,6;UBERON:0003684,8.41e-09,6;UBERON:0001178,8.41e-09,6;UBERON:0004457,1.23e-07,12;UBERON:0000042,1.23e-07,12;UBERON:0002199,1.77e-07,46;UBERON:0002416,1.77e-07,46 | |||
|phase1_expression=2.90685406832891,8.34992043174834,2.39622486963151,4.00293193412522,0.893922188854576,4.36169262050184,0,0,0,0,0,0.218441372130172,0,0,0,0.672325146451775,0,0,0.487932798790507,0,0.612002073732759,0,0.286235987131057,0,0.251085279189606,0,0.0821005894499457,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0.786021525498329,0.411202997999018,0,0,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0.289648807765598,0,0,0,1.0843174571537,2.00535164254356,2.02785126545153,0,0.973269740605272,0,0.221729397462564,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,1.64619665163954,1.19168262731897,0.286836620748814,1.41867352879343,1.68203280042692,0,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0.421352420106746,0,0.491337269247072,0.103325781175765,0,0.741800787835671,0,0,0.168336113954066,0.250237039743928,0,0.877955241761676,1.83892677479412,0.600952235626387,0.567160915800105,10.404598869954,2.98980344345994,1.69545520927649,1.50045548042201,0.515262646192195,4.12224864073007,1.48893485065272,2.02531598689519,1.55899208257918,3.28163906517349,0.828449087780694,0.969876340912871,4.26011511019937,1.0075209822764,1.3564847384839,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,3.21620469096443,0,1.85747171212792,1.44375896333917,1.18306800039844,1.34867752062481,0.723033089650446,0.661763836394364,0.871517776369625,0.71181185733329,0.943819157121151,0.588664395376038,2.69323009862473,0,0,0,0,0,0,1.18157981336281,0,0.245976877086227,0.171567810298526,0,0,0.201057944823262,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0.0895585227028483,0.871901815541886,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.1466765716419,1.68053230485111,0,0,1.32969058292435,0,0.514414748524284,0,0,0.285955987316295,0,0,0,0,0.791951872933429,0,0,0.499864955910285,0,0,0,2.39624855491583,1.14861935834114,0,1.15825045334063,2.67119219315498,1.07436577943937,0.336255431980582,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0.813795071099207,2.07970861530807,3.92543775353756,2.36553622550902,1.28855556491985,0.601892199455438,0,0,8.63493278096067,0.184369168541703,1.39013783148933,0,0,0,0,0,0.606255142892519,0,0,2.48107807818777,5.67809301165831,4.77122160536225,2.56278298511402,3.58195074346692,7.56013429374955,0,0.616838775210622,0.177561725313127,0.328508624055237,0.519254429183621,0.581051892299796,0.241718899183244,0.200506470303285,0.736647911487171,0.574072240823034,3.64182336013434,1.44236856455367,0,0.15403067420883,0,0,0.105551628892876,0,0,0.863663664408557,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0.325378394664303,0,0.457847324091717,0.330037999682352,0,0,1.6068392984416,0.290012154876366,0,0,0.137836572484531,0,0.290033387828457,0.340906509664404,1.33548053470106,0,0.192190067365106,0.255225424989168,0.2023155617111,2.32422774648643,3.1481234683064,0,0,0.532306030317022,0,0.18532421910392,0.286249773483982,0,0.632758849437452,0,0,0,0,0,0,0.274537029736055,0.353437207037059,0.404364963146632,3.17020642346017,0,0,0.243713489631284,0,1.50149902548784,0.848432591722276,0,0,1.32687795048244,1.31535265576129,0,0.655894752046633,0.202910376962704,0,0.563391205064483,0.286822704408103,0.0982490410131212,0,0,1.89996871767898,4.61012850143863,0,0,0.192444225451024,0,0,0.188287601553558,0,0,0,0,0,0,1.13929437434833,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0.0711418433484141,0.159426272728822,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0.447352215784832,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0.284136146806413,1.43246690842614,0,5.52889263778618,0,0.281338832821026,0,0,0,0.398495976502139,0,0.503865495708552,0,0,2.48831670129446,0.179736702294654,0.179021174675609,0,0,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0.341380344856499,0.762760950878299,0.709163045303809,0,0,0.173624994933292,0,0.723578631752448,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0.0897576444097721,0,0,0.457987967009312,2.13213910407454,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.176915129006678,0,0,0,0,0,0.802577647298789,0.937057782901357,0.729819156862664,0,0,0,0,0.30607276163049,0,0,0.311064574191741,0,0,0,0,0,0,0.867798691675654,0.293977192243133,0.174118413160805,0,0,0.870806981601766,0.65780385377567,0.492692742319255,0.193978032976839,0.0882561266915003,0.225980740780532,0.274083849293502,0.19871461170299,0.0633107959558787,2.15106521008283,0,0,0.39961921916426,0,0,0,1.00838358591705,0.124252535565433,0.471388069233591,0.815425236441684,0.523014231561666,0.407992870545287,0,0,0,0,2.14882720709979,0.525774708558629,0.279282401272254,3.20824593616357,1.43574604915363,1.19807400299395,3.004582336956,1.11585728720936,0.873385142327441,0.360299883542404,0,0.393915911536118,0.41207929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| ||
|short_description=p16@LMO7 | |short_description=p16@LMO7 | ||
}} | }} |
Latest revision as of 00:22, 18 September 2015
Short description: | p16@LMO7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_LMO7_5end |
Coexpression cluster: | C3385_Fibroblast_mesenchymal_Preadipocyte_Adipocyte_amniotic_Ewing_Osteoblast |
Association with transcript: | 368bp_to_ENST00000532785_5end |
EntrezGene: | LMO7 |
HGNC: | 6646 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.79e-11 | 76 |
skin fibroblast | 3.36e-09 | 23 |
preadipocyte of the breast | 3.38e-07 | 3 |
omentum preadipocyte | 3.73e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 6.62e-09 | 41 |
omentum | 8.41e-09 | 6 |
peritoneum | 8.41e-09 | 6 |
abdominal cavity | 8.41e-09 | 6 |
visceral peritoneum | 8.41e-09 | 6 |
cavity lining | 1.23e-07 | 12 |
serous membrane | 1.23e-07 | 12 |
integument | 1.77e-07 | 46 |
integumental system | 1.77e-07 | 46 |