FFCP PHASE1:Hg19::chr5:43397184..43397286,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:43397184..43397286,- to FFCP PHASE1:Hg19::chr5:43397184..43397286,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56477 | |EntrezGene=56477 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17700 | |HGNC=17700 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010ivn.2_5end | |||
|cluster_id=chr5:43397184..43397286,- | |||
|description=CAGE_peak_1_at_CCL28_5end | |||
|id=chr5:43397184..43397286,- | |||
|ontology_enrichment_celltype=CL:0000791!3.55e-09!18;CL:0000789!3.55e-09!18;CL:0002420!3.55e-09!18;CL:0002419!3.55e-09!18;CL:0000790!3.55e-09!18;CL:0000838!5.78e-08!52;CL:0000542!2.21e-07!53;CL:0000051!2.21e-07!53;CL:0000625!3.03e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.55e-09;18!CL:0000789;1.55e-09;18!CL:0002419;1.55e-09;18!CL:0000625;2.14e-07;11!CL:0000236;2.82e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.57e-09,18;CL:0000789,1.57e-09,18;CL:0002420,1.57e-09,18;CL:0002419,1.57e-09,18;CL:0000790,1.57e-09,18;CL:0000838,7.56e-09,52;CL:0000542,2.67e-08,53;CL:0000051,2.67e-08,53;CL:0000625,2.14e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.55e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=7.81217030863394,7.27941781229343,9.72585388262201,6.00439790118782,8.49226079411847,8.72338524100369,7.59899634504932,3.15859936713415,0,3.68600904752263,1.39560233594486,4.15038607047327,5.27533956456907,2.10402800032079,0.994192127183747,0,0,0,0,2.33930010345897,1.83600622119828,1.56727360739044,0.572471974262113,0.684372125364421,0.376627918784408,2.67446920117829,1.39571002064908,1.57421562627358,11.0141997517693,35.6961340230408,8.97933515233241,3.67768489791571,3.0120591877825,1.84877005083394,0,0,28.1856421761453,7.75593571944628,11.6315779532682,12.8036413722353,2.23915474239924,8.09734165047449,4.37878464978117,0.726991193897824,0,0.727752183563449,0.697287110717054,0.411167888021826,0.929119112685311,1.1507695692886,2.56160706529101,1.6553756092201,0.344745680736619,0.645484683583826,0,0.941211697713023,0.818718450173537,0.449446968890169,0.612167784741805,3.20929027076094,0.639337125799041,0.329851300186716,0.797854630486527,0.852449501065388,0.290209238628584,1.13477044938228,0,1.00499466102697,2.60741459210101,0.65156653411535,1.81619850790011,1.10483290796269,0.316462387440884,1.69004229049553,1.4882300997553,1.88692780957538,1.68492946719743,1.05123824989054,2.08943262706204,2.56511469367124,2.38700012638908,1.46131323011707,35.1992488922645,35.4990097320385,37.3593886622693,29.0176551345225,50.0494983795016,43.6811854365407,33.713288512028,45.7945802176975,58.0597228491637,52.8513470433845,65.3687220094141,25.1125524300149,20.1783082673353,23.7045676297569,47.9971839077753,28.2967749179399,29.1954128579303,51.8278135711102,48.562417728405,51.6058108250859,42.8618802497405,41.5561004181697,45.9585215660746,50.9527957542329,54.9731843442982,41.2454049516674,41.2288131764814,30.7498881608874,33.1620021343018,37.0947949740867,54.4211686804762,58.8589821797369,35.5420780936921,30.026975814855,33.3401829433671,36.0808817756761,36.9408750348474,25.4852331459277,29.9498388773953,27.5631092890028,29.3621482201657,37.628063679399,47.4736760898914,30.0707110095901,32.8451198768419,39.1117081855981,27.2788999699177,47.7920532813237,12.1903433156981,1.34140171940727,4.73091478821062,7.59022220007589,6.01605492763067,8.5459446186886,25.4491503056352,19.9520296824081,2.45790524626576,1.77383517970051,1.22968699970376,5.56661070865279,3.64295288292542,7.41568885568859,9.7364218096405,9.22887607686116,2.26028532882071,3.33886874027479,5.71994910780128,5.94332002127304,1.98762407366705,0.860234595106124,0.347140501607594,0,0.419499436209906,0,0,2.06733407335463,3.5576626268671,2.67776490211736,6.44526907374635,0.760272105718513,1.70843440283719,1.10298924103761,0,3.12549048994279,4.93964619777574,4.61707069981621,0,0,0,3.9534125230819,0,4.36094052142534,4.47274756525787,1.2663051166458,4.237093786023,1.43418310374407,1.06400514659507,2.24271040056923,1.06748995729705,0,0.933633106199299,0.404132016209064,0,0.756787138224657,0,0,1.24864030732128,0.570471821544449,0.448346041655403,1.17434498643765,0.161872944368132,0.280901613404497,0.408308342509787,1.59684612505298,1.65321249881225,0,0.247266929278557,0.910161361938026,2.15585442544872,0.336672227908132,0.500474079487857,1.10825646193673,0.438977620880838,0.612975591598039,0.901428353439581,1.58805056424029,1.07633781413317,0.640672166455702,4.23863802319124,0,0.309157587715317,0.772921620136887,0.558350568994769,6.24472429292685,7.60008640257349,1.00973509697646,0.644349290496095,0,1.42003837006646,1.20902517873168,1.18692414617341,8.69673839234836,5.72766853240753,8.03052867089211,9.63592278423804,7.95178609928912,10.9222306297347,6.11600224590686,10.0928340350251,0,0,3.85944562915731,0,8.8229906326076,3.60939740834793,1.0647612003586,2.36018566109342,0.964044119533928,0.772057809126758,1.08939722046203,0.474541238222193,1.07865046528132,0.784885860501384,2.30848294167834,0,2.80483547606892,0.4115740113314,0,7.60530208930985,1.96565443335525,5.31710916013264,0,15.4965432564323,14.5832638753747,8.01177083482967,0,5.12697759299317,2.31471112896324,0,1.03993478527958,2.88662684050547,3.70977295920246,0.587043471179108,5.4859250149208,2.77791307545966,5.70762456703795,7.11183958163348,11.1603201072333,8.12516120088411,0.234004265139238,3.41851673264075,9.3733833986777,8.23112428174412,7.93940544557364,2.50763863567975,0.871901815541886,5.75074018747817,12.8092441852945,10.3897152135607,36.6970764507167,35.1652686337386,40.523821129868,54.7986827741419,63.7920670682324,36.3374086351146,22.2394179829517,49.3571964975953,69.3792463619449,95.7518549312437,0.560655421726804,0.87192013766656,1.24675085895615,0.129271715757778,0,0.845302752556,0.797814349754612,1.04007436911366,4.8869401109807,2.83698264046557,2.1313774321288,8.721657613147,0.542621605391443,0,0,6.39705507736582,0.791951872933429,0.904318131178758,0,1.3996218765488,15.8110914833548,4.52031382288914,8.43335757932127,0.958499421966331,0,0,10.5690353867333,1.64381058040307,6.62525563987614,0,41.9675519230105,32.7753913786466,38.6312539202043,1.01637849688985,3.90419561572865,0,0.1675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| ||
|short_description=p1@CCL28 | |||
}} | }} |
Latest revision as of 00:35, 18 September 2015
Short description: | p1@CCL28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCL28_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc010ivn.2_5end |
EntrezGene: | CCL28 |
HGNC: | 17700 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.57e-09 | 18 |
alpha-beta T cell | 1.57e-09 | 18 |
immature T cell | 1.57e-09 | 18 |
mature T cell | 1.57e-09 | 18 |
immature alpha-beta T cell | 1.57e-09 | 18 |
lymphoid lineage restricted progenitor cell | 7.56e-09 | 52 |
lymphocyte | 2.67e-08 | 53 |
common lymphoid progenitor | 2.67e-08 | 53 |
CD8-positive, alpha-beta T cell | 2.14e-07 | 11 |