FFCP PHASE1:Hg19::chr15:52121893..52121929,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29766 | |EntrezGene=29766 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11873 | |HGNC=11873 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_uc002abm.2_5end | |association_with_transcript=4bp_to_uc002abm.2_5end | ||
|cluster_id=chr15:52121893..52121929,+ | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_2_at_TMOD3_5end | |description=CAGE_peak_2_at_TMOD3_5end | ||
|id=chr15:52121893..52121929,+ | |id=chr15:52121893..52121929,+ | ||
|ontology_enrichment_celltype=CL:0000066!6.63e-10!254;CL:0000077!6.80e-07!19 | |ontology_enrichment_celltype=CL:0000066!6.63e-10!254;CL:0000077!6.80e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0000077;3.95e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.23e-10,253;CL:0000077,6.23e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;7.57e-08;29 | |||
|ontology_enrichment_disease=DOID:305!1.43e-07!106;DOID:0050687!5.58e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.50e-07,106;DOID:0050687,8.85e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.77e-11!169;UBERON:0000925!3.77e-11!169;UBERON:0006595!3.77e-11!169;UBERON:0001007!9.25e-10!155;UBERON:0001555!9.25e-10!155;UBERON:0007026!9.25e-10!155;UBERON:0001004!8.37e-09!72;UBERON:0000077!2.24e-08!130;UBERON:0005631!3.54e-08!14;UBERON:0000158!3.54e-08!14;UBERON:0000065!5.80e-08!53;UBERON:0004921!4.54e-07!129;UBERON:0004185!4.54e-07!129;UBERON:0005911!7.75e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.21e-12,160;UBERON:0000925,1.21e-12,160;UBERON:0006595,1.21e-12,160;UBERON:0001007,2.14e-11,145;UBERON:0001555,2.14e-11,145;UBERON:0007026,2.14e-11,145;UBERON:0001004,3.86e-09,74;UBERON:0005631,3.18e-08,14;UBERON:0000158,3.18e-08,14;UBERON:0004921,3.68e-08,118;UBERON:0000065,7.95e-08,54;UBERON:0005911,4.75e-07,82;UBERON:0008947,7.98e-07,38;UBERON:0003258,7.98e-07,38 | |||
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| ||
|short_description=p2@TMOD3 | |short_description=p2@TMOD3 | ||
}} | }} |
Latest revision as of 01:34, 18 September 2015
Short description: | p2@TMOD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMOD3_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 4bp_to_uc002abm.2_5end |
EntrezGene: | TMOD3 |
HGNC: | 11873 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.23e-10 | 253 |
mesothelial cell | 6.23e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.21e-12 | 160 |
endoderm | 1.21e-12 | 160 |
presumptive endoderm | 1.21e-12 | 160 |
digestive system | 2.14e-11 | 145 |
digestive tract | 2.14e-11 | 145 |
primitive gut | 2.14e-11 | 145 |
respiratory system | 3.86e-09 | 74 |
extraembryonic membrane | 3.18e-08 | 14 |
membranous layer | 3.18e-08 | 14 |
subdivision of digestive tract | 3.68e-08 | 118 |
respiratory tract | 7.95e-08 | 54 |
endo-epithelium | 4.75e-07 | 82 |
respiratory primordium | 7.98e-07 | 38 |
endoderm of foregut | 7.98e-07 | 38 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.50e-07 | 106 |
cell type cancer | 8.85e-07 | 143 |