FFCP PHASE1:Hg19::chr5:52084126..52084133,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:52084126..52084133,+
|short_description=p8@ITGA1
|description=CAGE_peak_8_at_ITGA1_5end
|association_with_transcript=-2bp_to_NM_181501_5end
|EntrezGene=36...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3672 | |EntrezGene=3672 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6134 | |HGNC=6134 | ||
|TSSclassifier=strong | |||
|UniProt=P56199 | |UniProt=P56199 | ||
|association_with_transcript=-2bp_to_NM_181501_5end | |||
|cluster_id=chr5:52084126..52084133,+ | |||
|coexpression_cluster_id=C1277 | |||
|description=CAGE_peak_8_at_ITGA1_5end | |||
|id=chr5:52084126..52084133,+ | |||
|ontology_enrichment_celltype=CL:0000136!9.31e-08!15;CL:0000181!6.77e-07!12;CL:0000417!6.77e-07!12;CL:0000668!6.77e-07!12;CL:0000414!6.77e-07!12;CL:0000412!6.77e-07!12;CL:0000182!6.77e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000136;4.02e-34;13!CL:0002615;4.15e-13;3!CL:0000222;3.00e-10;1!CL:0002188;4.69e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.68e-29,15;CL:0002615,6.17e-13,3;CL:0002188,4.53e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002417!3.89e-08!61;UBERON:0000916!3.89e-08!61;UBERON:0003929!9.56e-08!54;UBERON:0008835!9.91e-08!22;UBERON:0003894!9.91e-08!22;UBERON:0002100!1.09e-07!216;UBERON:0009854!3.18e-07!23;UBERON:0002107!4.20e-07!19;UBERON:0006925!4.20e-07!19;UBERON:0008836!4.20e-07!19;UBERON:0000466!5.12e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.39e-14;6!UBERON:0002358;2.39e-14;6!UBERON:0003684;2.39e-14;6!UBERON:0001178;2.39e-14;6!UBERON:0002135;3.00e-10;1!UBERON:0004457;9.57e-10;9!UBERON:0000042;9.57e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,3.94e-14,6;UBERON:0002358,3.94e-14,6;UBERON:0003684,3.94e-14,6;UBERON:0001178,3.94e-14,6;UBERON:0002135,2.50e-10,1;UBERON:0004457,2.53e-07,12;UBERON:0000042,2.53e-07,12 | |||
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| ||
|short_description=p8@ITGA1 | |||
}} | }} |
Latest revision as of 02:23, 18 September 2015
Short description: | p8@ITGA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ITGA1_5end |
Coexpression cluster: | C1277_Hepatocyte_mature_mesenchymal_smooth_bladder_normal_cholangiocellular |
Association with transcript: | -2bp_to_NM_181501_5end |
EntrezGene: | ITGA1 |
HGNC: | 6134 |
UniProt: | P56199 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.68e-29 | 15 |
adipocyte of omentum tissue | 6.17e-13 | 3 |
glomerular endothelial cell | 4.53e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
omentum | 3.94e-14 | 6 |
peritoneum | 3.94e-14 | 6 |
abdominal cavity | 3.94e-14 | 6 |
visceral peritoneum | 3.94e-14 | 6 |
mitral valve | 2.50e-10 | 1 |
cavity lining | 2.53e-07 | 12 |
serous membrane | 2.53e-07 | 12 |