FFCP PHASE1:Hg19::chr11:46402583..46402669,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4192 | |EntrezGene=4192 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6972 | |HGNC=6972 | ||
|TSSclassifier=strong | |||
|UniProt=P21741 | |UniProt=P21741 | ||
|association_with_transcript=0bp_to_ENST00000359803,ENST00000405994,ENST00000490240,NM_001012334,uc001nco.2_5end | |association_with_transcript=0bp_to_ENST00000359803,ENST00000405994,ENST00000490240,NM_001012334,uc001nco.2_5end | ||
|cluster_id=chr11:46402583..46402669,+ | |||
|description=CAGE_peak_3_at_MDK_5end | |description=CAGE_peak_3_at_MDK_5end | ||
|id=chr11:46402583..46402669,+ | |id=chr11:46402583..46402669,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.27e-11!180;CL:0002321!1.38e-09!248;CL:0000220!3.77e-09!246;CL:0000222!9.18e-09!119;CL:0000393!7.00e-08!60;CL:0000211!7.00e-08!60;CL:0000183!1.23e-07!59 | |ontology_enrichment_celltype=CL:0000055!6.27e-11!180;CL:0002321!1.38e-09!248;CL:0000220!3.77e-09!246;CL:0000222!9.18e-09!119;CL:0000393!7.00e-08!60;CL:0000211!7.00e-08!60;CL:0000183!1.23e-07!59 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.08e-09,121;CL:0002321,7.06e-09,250;CL:0000393,3.15e-08,61;CL:0000211,3.15e-08,61;CL:0000187,5.90e-07,55 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!7.16e-16!347;UBERON:0000119!4.25e-14!312;UBERON:0000483!5.64e-14!309;UBERON:0000468!4.06e-13!659;UBERON:0005256!4.05e-12!143;UBERON:0000475!9.31e-12!365;UBERON:0000477!4.51e-11!286;UBERON:0004111!1.14e-10!241;UBERON:0003914!2.04e-10!118;UBERON:0000490!6.82e-10!138;UBERON:0000922!8.62e-10!612;UBERON:0003104!1.91e-09!238;UBERON:0009142!1.91e-09!238;UBERON:0000467!6.12e-09!625;UBERON:0000480!7.36e-09!626;UBERON:0002100!1.76e-08!216;UBERON:0002050!4.60e-08!605;UBERON:0005423!4.60e-08!605;UBERON:0000025!5.62e-08!194;UBERON:0000923!9.21e-08!604;UBERON:0005291!9.21e-08!604;UBERON:0006598!9.21e-08!604;UBERON:0002532!9.21e-08!604;UBERON:0005172!9.25e-07!55;UBERON:0005173!9.25e-07!55 | |ontology_enrichment_uberon=UBERON:0000481!7.16e-16!347;UBERON:0000119!4.25e-14!312;UBERON:0000483!5.64e-14!309;UBERON:0000468!4.06e-13!659;UBERON:0005256!4.05e-12!143;UBERON:0000475!9.31e-12!365;UBERON:0000477!4.51e-11!286;UBERON:0004111!1.14e-10!241;UBERON:0003914!2.04e-10!118;UBERON:0000490!6.82e-10!138;UBERON:0000922!8.62e-10!612;UBERON:0003104!1.91e-09!238;UBERON:0009142!1.91e-09!238;UBERON:0000467!6.12e-09!625;UBERON:0000480!7.36e-09!626;UBERON:0002100!1.76e-08!216;UBERON:0002050!4.60e-08!605;UBERON:0005423!4.60e-08!605;UBERON:0000025!5.62e-08!194;UBERON:0000923!9.21e-08!604;UBERON:0005291!9.21e-08!604;UBERON:0006598!9.21e-08!604;UBERON:0002532!9.21e-08!604;UBERON:0005172!9.25e-07!55;UBERON:0005173!9.25e-07!55 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,7.59e-15,160;UBERON:0009142,7.59e-15,160;UBERON:0000119,6.51e-14,309;UBERON:0000483,8.63e-14,306;UBERON:0005256,7.38e-11,122;UBERON:0003914,3.06e-10,117;UBERON:0004111,7.22e-10,240;UBERON:0000490,4.39e-09,148;UBERON:0002100,4.66e-08,199;UBERON:0000025,2.19e-07,192;UBERON:0000922,2.68e-07,592 | |||
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| ||
|short_description=p3@MDK | |short_description=p3@MDK | ||
}} | }} |
Latest revision as of 02:52, 18 September 2015
Short description: | p3@MDK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MDK_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000359803, ENST00000405994, ENST00000490240, NM_001012334, uc001nco.2_5end |
EntrezGene: | MDK |
HGNC: | 6972 |
UniProt: | P21741 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.08e-09 | 121 |
embryonic cell | 7.06e-09 | 250 |
electrically responsive cell | 3.15e-08 | 61 |
electrically active cell | 3.15e-08 | 61 |
muscle cell | 5.90e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 7.59e-15 | 160 |
entire embryonic mesenchyme | 7.59e-15 | 160 |
cell layer | 6.51e-14 | 309 |
epithelium | 8.63e-14 | 306 |
trunk mesenchyme | 7.38e-11 | 122 |
epithelial tube | 3.06e-10 | 117 |
anatomical conduit | 7.22e-10 | 240 |
unilaminar epithelium | 4.39e-09 | 148 |
trunk | 4.66e-08 | 199 |
tube | 2.19e-07 | 192 |
embryo | 2.68e-07 | 592 |