FFCP PHASE1:Hg19::chr2:171571931..171571959,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389058 | |EntrezGene=389058 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14529 | |HGNC=14529 | ||
|TSSclassifier=strong | |||
|UniProt=Q6BEB4 | |UniProt=Q6BEB4 | ||
|association_with_transcript=70bp_to_ENST00000375281_5end | |association_with_transcript=70bp_to_ENST00000375281_5end | ||
|cluster_id=chr2:171571931..171571959,+ | |||
|coexpression_cluster_id=C258 | |||
|description=CAGE_peak_3_at_SP5_5end | |description=CAGE_peak_3_at_SP5_5end | ||
|id=chr2:171571931..171571959,+ | |id=chr2:171571931..171571959,+ | ||
|ontology_enrichment_celltype=CL:0000181!5.55e-07!12;CL:0000417!5.55e-07!12;CL:0000668!5.55e-07!12;CL:0000414!5.55e-07!12;CL:0000412!5.55e-07!12;CL:0000182!5.55e-07!12 | |ontology_enrichment_celltype=CL:0000181!5.55e-07!12;CL:0000417!5.55e-07!12;CL:0000668!5.55e-07!12;CL:0000414!5.55e-07!12;CL:0000412!5.55e-07!12;CL:0000182!5.55e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.57e-16;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.26e-16,12;CL:0000223,4.31e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.21e-13;11!UBERON:0009497;1.95e-11;13!UBERON:0001041;5.15e-10;30!UBERON:0003104;2.01e-07;31 | |||
|ontology_enrichment_disease=DOID:305!2.55e-09!106;DOID:299!1.16e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3493;9.62e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,9.64e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.35e-13!115;UBERON:0001007!5.72e-13!155;UBERON:0001555!5.72e-13!155;UBERON:0007026!5.72e-13!155;UBERON:0004921!7.56e-12!129;UBERON:0004185!7.56e-12!129;UBERON:0004119!1.06e-11!169;UBERON:0000925!1.06e-11!169;UBERON:0006595!1.06e-11!169;UBERON:0000077!1.57e-10!130;UBERON:0005911!1.27e-09!82;UBERON:0005409!9.14e-08!35;UBERON:0003929!9.49e-08!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;5.25e-12;25!UBERON:0002107;4.64e-10;19!UBERON:0006925;4.64e-10;19!UBERON:0002108;6.08e-08;4!UBERON:0005409;6.08e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007499,2.81e-12,25;UBERON:0009497,3.91e-12,25;UBERON:0000015,3.91e-12,25;UBERON:0002423,3.91e-12,25;UBERON:0006235,3.91e-12,25;UBERON:0004161,3.91e-12,25;UBERON:0009856,9.68e-12,26;UBERON:0004921,1.51e-11,118;UBERON:0008835,3.66e-11,22;UBERON:0003894,3.66e-11,22;UBERON:0005911,8.15e-11,82;UBERON:0009854,1.28e-10,23;UBERON:0003929,2.16e-10,54;UBERON:0002107,4.06e-10,19;UBERON:0006925,4.06e-10,19;UBERON:0008836,4.06e-10,19;UBERON:0001007,1.82e-09,145;UBERON:0001555,1.82e-09,145;UBERON:0007026,1.82e-09,145;UBERON:0004119,4.23e-08,160;UBERON:0000925,4.23e-08,160;UBERON:0006595,4.23e-08,160;UBERON:0002108,6.86e-08,4;UBERON:0001041,2.19e-07,87;UBERON:0005409,6.39e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0.323745888736263,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.795178609928912,1.39432731443422,1.45125477021519,0.756962552626885,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,1.77236972004421,0,4.42758378755209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01637849688985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.25156697549733,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0.379473173765715,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,2.61996756571508,2.4906390476222,0,0,12.2178543126758,0,0.296964680832639,0,0,0,0.111308705022906,1.31843099381408,0,0.597743964753209,0.276283915531148,0.251932747854276,0,0.123084805461069,0,0,0,0,1.1837208676432,0,0,0,0,0,0,0,1.44999915086959,0,0.508507300585533,0,0,0,0.347249989866585,0.885741385813839,0.120596438625408,0,0,0.591095237907095,0.438770794307945,0,0.139423744278603,2.84715956464049,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0,0,0,0,12.7217764290547,0.649165919226273,0.995261931078505,0.973033209536731,0.611030144933625,0.889563386041866,1.85345908419754,1.14864144456001,0.134802265961354,0,0,0,0,0,1.18375320854817,1.20990716048664,0,0.252746318513952,0,0.414752765588989,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0.698906672968121,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0.0633107959558787,0.195551382734803,0.480952921509202,1.49417096317547,0.799238438328521,0.144090417154106,0.572682980829578,0,0,0.124252535565433,0,0,0.313808538937,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,25.6291088960398,19.0655301183481,16.5655875346145,18.0641497529216,0,0,0,0.408610218334727,1.12527203925513,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,1.15149118391667,0,0,0,0,0,0,0,0.082092520749339,0,0,0.58620893471233,0,0,0,0,0.704815022316672,0.854299300541557,0.471612915298998,2.48543433208317,0.992332043623902,0,0,0,0,0,0,0,6.12510975375914,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0.453411851024545,0.694567422971502,0,0.358177682162975,2.16161013012681,1.09642024789354,1.41351316756705,0,0,0,0,0.911579868532147,0,0,0,0,0,0,0.211312123358627,0,0.106691729694141,0,0,0,0,0,0,0.323474434190045,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0.322951291263702,0,0.981477185010256,0,0,0,0,0.690359926060101,0.198916222116275,0.601682626794058,0,0,0,0.163771917510097,2.95712172434091,0,0,0,0.0634158101939068,0,0,0.992422356778588,0,0,0,0,0,0,0.266107110487916,0,2.40083213212386,0.135939465953663,0.197318320688547,0,0.222462803784138,1.80534113556182,0,0,0.913158720509496,0.215927591218621,0,1.21510125100316,0,2.20858708199438,0,0,0,0,0,0,0,0,0.423387050190929,0,0.31020638566432,0.955538938977433,0,3.63155864376399,14.2643972229255,0,0.102662806856247,8.11870101936739,0.485710993059139,0,0,0,4.96962760971424,0.219881033490858,0,0.694567422971502,1.09279780251979,0,0.735444965261716,0,0,0,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,1.46067277649303,0.458729283404541,0.143339583151451,4.41760374140917,0.0679914901909147,0,3.7031878836078,0,0,0,0.126166424835079,0.218531143927391,3.54755802832024,0,0.26721740526556,1.56221329209236,0,0.833565680400634,0.803892390468535,0,0.103432995861895,0.852935927603924,0.952257725854961,0.0645889098360061,0.124149428591716,0.112131862580613,0,0,0.435433495793923,0.342233301085281,1.21233695426258,0.717222053926764,0.665320713092027,0.162806537221949,0.960546112899439,0,0.0898252021065869,2.34640942403454,2.07810455110873,0.406896178315738,0.665756774185513,0.201273793591026,0 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| ||
|short_description=p3@SP5 | |short_description=p3@SP5 | ||
}} | }} |
Latest revision as of 03:17, 18 September 2015
Short description: | p3@SP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SP5_5end |
Coexpression cluster: | C258_hepatoblastoma_hepatocellular_signet_colon_Intestinal_Prostate_gastric |
Association with transcript: | 70bp_to_ENST00000375281_5end |
EntrezGene: | SP5 |
HGNC: | 14529 |
UniProt: | Q6BEB4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.26e-16 | 12 |
endodermal cell | 4.31e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
epithelial sac | 2.81e-12 | 25 |
epithelium of foregut-midgut junction | 3.91e-12 | 25 |
anatomical boundary | 3.91e-12 | 25 |
hepatobiliary system | 3.91e-12 | 25 |
foregut-midgut junction | 3.91e-12 | 25 |
septum transversum | 3.91e-12 | 25 |
sac | 9.68e-12 | 26 |
subdivision of digestive tract | 1.51e-11 | 118 |
hepatic diverticulum | 3.66e-11 | 22 |
liver primordium | 3.66e-11 | 22 |
endo-epithelium | 8.15e-11 | 82 |
digestive tract diverticulum | 1.28e-10 | 23 |
gut epithelium | 2.16e-10 | 54 |
liver | 4.06e-10 | 19 |
digestive gland | 4.06e-10 | 19 |
liver bud | 4.06e-10 | 19 |
digestive system | 1.82e-09 | 145 |
digestive tract | 1.82e-09 | 145 |
primitive gut | 1.82e-09 | 145 |
endoderm-derived structure | 4.23e-08 | 160 |
endoderm | 4.23e-08 | 160 |
presumptive endoderm | 4.23e-08 | 160 |
small intestine | 6.86e-08 | 4 |
foregut | 2.19e-07 | 87 |
gastrointestinal system | 6.39e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 9.64e-10 | 2 |