FFCP PHASE1:Hg19::chr2:171571931..171571959,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389058 | |EntrezGene=389058 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14529 | |HGNC=14529 | ||
|TSSclassifier=strong | |||
|UniProt=Q6BEB4 | |UniProt=Q6BEB4 | ||
|association_with_transcript=70bp_to_ENST00000375281_5end | |association_with_transcript=70bp_to_ENST00000375281_5end | ||
|cluster_id=chr2:171571931..171571959,+ | |||
|coexpression_cluster_id=C258 | |coexpression_cluster_id=C258 | ||
|description=CAGE_peak_3_at_SP5_5end | |description=CAGE_peak_3_at_SP5_5end | ||
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|ontology_enrichment_celltype=CL:0000181!5.55e-07!12;CL:0000417!5.55e-07!12;CL:0000668!5.55e-07!12;CL:0000414!5.55e-07!12;CL:0000412!5.55e-07!12;CL:0000182!5.55e-07!12 | |ontology_enrichment_celltype=CL:0000181!5.55e-07!12;CL:0000417!5.55e-07!12;CL:0000668!5.55e-07!12;CL:0000414!5.55e-07!12;CL:0000412!5.55e-07!12;CL:0000182!5.55e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.57e-16;12 | |ontology_enrichment_celltype_v019=CL:0000182;1.57e-16;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.26e-16,12;CL:0000223,4.31e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.21e-13;11!UBERON:0009497;1.95e-11;13!UBERON:0001041;5.15e-10;30!UBERON:0003104;2.01e-07;31 | |ontology_enrichment_development_v019=UBERON:0004161;1.21e-13;11!UBERON:0009497;1.95e-11;13!UBERON:0001041;5.15e-10;30!UBERON:0003104;2.01e-07;31 | ||
|ontology_enrichment_disease=DOID:305!2.55e-09!106;DOID:299!1.16e-07!25 | |ontology_enrichment_disease=DOID:305!2.55e-09!106;DOID:299!1.16e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:3493;9.62e-10;2 | |ontology_enrichment_disease_v019=DOID:3493;9.62e-10;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,9.64e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.35e-13!115;UBERON:0001007!5.72e-13!155;UBERON:0001555!5.72e-13!155;UBERON:0007026!5.72e-13!155;UBERON:0004921!7.56e-12!129;UBERON:0004185!7.56e-12!129;UBERON:0004119!1.06e-11!169;UBERON:0000925!1.06e-11!169;UBERON:0006595!1.06e-11!169;UBERON:0000077!1.57e-10!130;UBERON:0005911!1.27e-09!82;UBERON:0005409!9.14e-08!35;UBERON:0003929!9.49e-08!54 | |ontology_enrichment_uberon=UBERON:0007023!1.35e-13!115;UBERON:0001007!5.72e-13!155;UBERON:0001555!5.72e-13!155;UBERON:0007026!5.72e-13!155;UBERON:0004921!7.56e-12!129;UBERON:0004185!7.56e-12!129;UBERON:0004119!1.06e-11!169;UBERON:0000925!1.06e-11!169;UBERON:0006595!1.06e-11!169;UBERON:0000077!1.57e-10!130;UBERON:0005911!1.27e-09!82;UBERON:0005409!9.14e-08!35;UBERON:0003929!9.49e-08!54 | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;5.25e-12;25!UBERON:0002107;4.64e-10;19!UBERON:0006925;4.64e-10;19!UBERON:0002108;6.08e-08;4!UBERON:0005409;6.08e-08;22 | |ontology_enrichment_uberon_v019=UBERON:0002423;5.25e-12;25!UBERON:0002107;4.64e-10;19!UBERON:0006925;4.64e-10;19!UBERON:0002108;6.08e-08;4!UBERON:0005409;6.08e-08;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007499,2.81e-12,25;UBERON:0009497,3.91e-12,25;UBERON:0000015,3.91e-12,25;UBERON:0002423,3.91e-12,25;UBERON:0006235,3.91e-12,25;UBERON:0004161,3.91e-12,25;UBERON:0009856,9.68e-12,26;UBERON:0004921,1.51e-11,118;UBERON:0008835,3.66e-11,22;UBERON:0003894,3.66e-11,22;UBERON:0005911,8.15e-11,82;UBERON:0009854,1.28e-10,23;UBERON:0003929,2.16e-10,54;UBERON:0002107,4.06e-10,19;UBERON:0006925,4.06e-10,19;UBERON:0008836,4.06e-10,19;UBERON:0001007,1.82e-09,145;UBERON:0001555,1.82e-09,145;UBERON:0007026,1.82e-09,145;UBERON:0004119,4.23e-08,160;UBERON:0000925,4.23e-08,160;UBERON:0006595,4.23e-08,160;UBERON:0002108,6.86e-08,4;UBERON:0001041,2.19e-07,87;UBERON:0005409,6.39e-07,25 | |||
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| ||
|short_description=p3@SP5 | |short_description=p3@SP5 | ||
}} | }} |
Latest revision as of 03:17, 18 September 2015
Short description: | p3@SP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SP5_5end |
Coexpression cluster: | C258_hepatoblastoma_hepatocellular_signet_colon_Intestinal_Prostate_gastric |
Association with transcript: | 70bp_to_ENST00000375281_5end |
EntrezGene: | SP5 |
HGNC: | 14529 |
UniProt: | Q6BEB4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.26e-16 | 12 |
endodermal cell | 4.31e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
epithelial sac | 2.81e-12 | 25 |
epithelium of foregut-midgut junction | 3.91e-12 | 25 |
anatomical boundary | 3.91e-12 | 25 |
hepatobiliary system | 3.91e-12 | 25 |
foregut-midgut junction | 3.91e-12 | 25 |
septum transversum | 3.91e-12 | 25 |
sac | 9.68e-12 | 26 |
subdivision of digestive tract | 1.51e-11 | 118 |
hepatic diverticulum | 3.66e-11 | 22 |
liver primordium | 3.66e-11 | 22 |
endo-epithelium | 8.15e-11 | 82 |
digestive tract diverticulum | 1.28e-10 | 23 |
gut epithelium | 2.16e-10 | 54 |
liver | 4.06e-10 | 19 |
digestive gland | 4.06e-10 | 19 |
liver bud | 4.06e-10 | 19 |
digestive system | 1.82e-09 | 145 |
digestive tract | 1.82e-09 | 145 |
primitive gut | 1.82e-09 | 145 |
endoderm-derived structure | 4.23e-08 | 160 |
endoderm | 4.23e-08 | 160 |
presumptive endoderm | 4.23e-08 | 160 |
small intestine | 6.86e-08 | 4 |
foregut | 2.19e-07 | 87 |
gastrointestinal system | 6.39e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 9.64e-10 | 2 |