FFCP PHASE1:Hg19::chr7:29233853..29233864,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1124 | |EntrezGene=1124 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1944 | |HGNC=1944 | ||
|TSSclassifier=strong | |||
|UniProt=P52757 | |UniProt=P52757 | ||
|association_with_transcript=-163bp_to_ENST00000222792_5end | |association_with_transcript=-163bp_to_ENST00000222792_5end | ||
|cluster_id=chr7:29233853..29233864,+ | |||
|coexpression_cluster_id=C1458 | |||
|description=CAGE_peak_15_at_CHN2_5end | |description=CAGE_peak_15_at_CHN2_5end | ||
|id=chr7:29233853..29233864,+ | |id=chr7:29233853..29233864,+ | ||
|ontology_enrichment_celltype=CL:0002579!3.96e-07!3;CL:0002541!5.07e-07!3 | |ontology_enrichment_celltype=CL:0002579!3.96e-07!3;CL:0002541!5.07e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002579;5.56e-12;3!CL:0002334;2.42e-11;12!CL:0002581;1.30e-09;1!CL:0000097;1.55e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,6.23e-12,3;CL:0002334,2.39e-11,12;CL:0002581,1.06e-09,1;CL:0000097,1.32e-07,5;CL:0002028,1.32e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.51e-27;3 | |||
|ontology_enrichment_disease=DOID:171!4.72e-07!10 | |ontology_enrichment_disease=DOID:171!4.72e-07!10 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.21e-35!57;UBERON:0005068!4.21e-35!57;UBERON:0006241!4.21e-35!57;UBERON:0007135!4.21e-35!57;UBERON:0002616!3.26e-29!59;UBERON:0001017!4.16e-29!82;UBERON:0000955!2.03e-28!69;UBERON:0006238!2.03e-28!69;UBERON:0005743!3.14e-27!86;UBERON:0000073!1.37e-26!94;UBERON:0001016!1.37e-26!94;UBERON:0002780!6.85e-25!41;UBERON:0001890!6.85e-25!41;UBERON:0006240!6.85e-25!41;UBERON:0007023!3.12e-24!115;UBERON:0003080!3.93e-24!42;UBERON:0002346!8.56e-23!90;UBERON:0003075!7.84e-20!86;UBERON:0007284!7.84e-20!86;UBERON:0002020!4.89e-17!34;UBERON:0003528!4.89e-17!34;UBERON:0001893!5.19e-17!34;UBERON:0002791!7.63e-16!33;UBERON:0003056!1.86e-14!61;UBERON:0001869!2.39e-14!32;UBERON:0000924!2.83e-13!173;UBERON:0006601!2.83e-13!173;UBERON:0000033!1.63e-12!123;UBERON:0000153!2.45e-12!129;UBERON:0007811!2.45e-12!129;UBERON:0003076!4.32e-12!15;UBERON:0003057!4.32e-12!15;UBERON:0002619!1.84e-11!22;UBERON:0004121!2.30e-11!169;UBERON:0001950!8.06e-11!20;UBERON:0001894!1.43e-10!7;UBERON:0006222!1.43e-10!7;UBERON:0004733!6.36e-10!12;UBERON:0002028!6.36e-10!12;UBERON:0007277!6.36e-10!12;UBERON:0000956!8.86e-10!25;UBERON:0000203!8.86e-10!25;UBERON:0002308!9.32e-10!9;UBERON:0000125!9.32e-10!9;UBERON:0000025!4.73e-09!194;UBERON:0004732!4.88e-09!13;UBERON:0002298!3.31e-08!8;UBERON:0002680!4.88e-08!9;UBERON:0001895!4.88e-08!9;UBERON:0010092!4.88e-08!9;UBERON:0000200!1.82e-07!6;UBERON:0000475!2.90e-07!365;UBERON:0000476!5.07e-07!3;UBERON:0000920!5.07e-07!3;UBERON:0003124!5.71e-07!7;UBERON:0009663!8.97e-07!7 | |ontology_enrichment_uberon=UBERON:0001049!4.21e-35!57;UBERON:0005068!4.21e-35!57;UBERON:0006241!4.21e-35!57;UBERON:0007135!4.21e-35!57;UBERON:0002616!3.26e-29!59;UBERON:0001017!4.16e-29!82;UBERON:0000955!2.03e-28!69;UBERON:0006238!2.03e-28!69;UBERON:0005743!3.14e-27!86;UBERON:0000073!1.37e-26!94;UBERON:0001016!1.37e-26!94;UBERON:0002780!6.85e-25!41;UBERON:0001890!6.85e-25!41;UBERON:0006240!6.85e-25!41;UBERON:0007023!3.12e-24!115;UBERON:0003080!3.93e-24!42;UBERON:0002346!8.56e-23!90;UBERON:0003075!7.84e-20!86;UBERON:0007284!7.84e-20!86;UBERON:0002020!4.89e-17!34;UBERON:0003528!4.89e-17!34;UBERON:0001893!5.19e-17!34;UBERON:0002791!7.63e-16!33;UBERON:0003056!1.86e-14!61;UBERON:0001869!2.39e-14!32;UBERON:0000924!2.83e-13!173;UBERON:0006601!2.83e-13!173;UBERON:0000033!1.63e-12!123;UBERON:0000153!2.45e-12!129;UBERON:0007811!2.45e-12!129;UBERON:0003076!4.32e-12!15;UBERON:0003057!4.32e-12!15;UBERON:0002619!1.84e-11!22;UBERON:0004121!2.30e-11!169;UBERON:0001950!8.06e-11!20;UBERON:0001894!1.43e-10!7;UBERON:0006222!1.43e-10!7;UBERON:0004733!6.36e-10!12;UBERON:0002028!6.36e-10!12;UBERON:0007277!6.36e-10!12;UBERON:0000956!8.86e-10!25;UBERON:0000203!8.86e-10!25;UBERON:0002308!9.32e-10!9;UBERON:0000125!9.32e-10!9;UBERON:0000025!4.73e-09!194;UBERON:0004732!4.88e-09!13;UBERON:0002298!3.31e-08!8;UBERON:0002680!4.88e-08!9;UBERON:0001895!4.88e-08!9;UBERON:0010092!4.88e-08!9;UBERON:0000200!1.82e-07!6;UBERON:0000475!2.90e-07!365;UBERON:0000476!5.07e-07!3;UBERON:0000920!5.07e-07!3;UBERON:0003124!5.71e-07!7;UBERON:0009663!8.97e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.12e-13;6!UBERON:0003688;5.62e-13;6!UBERON:0002358;5.62e-13;6!UBERON:0003684;5.62e-13;6!UBERON:0001178;5.62e-13;6!UBERON:0004733;1.09e-11;12!UBERON:0002028;1.09e-11;12!UBERON:0004732;8.44e-11;13!UBERON:0002680;2.76e-09;9!UBERON:0001895;2.76e-09;9!UBERON:0004457;7.95e-09;9!UBERON:0000042;7.95e-09;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.13e-13,6;UBERON:0006215,1.13e-13,6;UBERON:0003688,6.78e-13,6;UBERON:0002358,6.78e-13,6;UBERON:0003684,6.78e-13,6;UBERON:0001178,6.78e-13,6;UBERON:0004733,1.31e-11,12;UBERON:0002028,1.31e-11,12;UBERON:0007277,1.31e-11,12;UBERON:0004732,9.96e-11,13;UBERON:0003076,2.57e-09,15;UBERON:0003057,2.57e-09,15;UBERON:0002680,2.77e-09,9;UBERON:0001895,2.77e-09,9;UBERON:0010092,2.77e-09,9 | |||
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|short_description=p15@CHN2 | |short_description=p15@CHN2 | ||
}} | }} |
Latest revision as of 04:00, 18 September 2015
Short description: | p15@CHN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_CHN2_5end |
Coexpression cluster: | C1458_cerebellum_small_temporal_parietal_occipital_somatostatinoma_neuroectodermal |
Association with transcript: | -163bp_to_ENST00000222792_5end |
EntrezGene: | CHN2 |
HGNC: | 1944 |
UniProt: | P52757 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 6.23e-12 | 3 |
preadipocyte | 2.39e-11 | 12 |
perirenal preadipocyte | 1.06e-09 | 1 |
mast cell | 1.32e-07 | 5 |
basophil mast progenitor cell | 1.32e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.13e-13 | 6 |
rhombic lip | 1.13e-13 | 6 |
omentum | 6.78e-13 | 6 |
peritoneum | 6.78e-13 | 6 |
abdominal cavity | 6.78e-13 | 6 |
visceral peritoneum | 6.78e-13 | 6 |
segmental subdivision of hindbrain | 1.31e-11 | 12 |
hindbrain | 1.31e-11 | 12 |
presumptive hindbrain | 1.31e-11 | 12 |
segmental subdivision of nervous system | 9.96e-11 | 13 |
posterior neural tube | 2.57e-09 | 15 |
chordal neural plate | 2.57e-09 | 15 |
regional part of metencephalon | 2.77e-09 | 9 |
metencephalon | 2.77e-09 | 9 |
future metencephalon | 2.77e-09 | 9 |