FFCP PHASE1:Hg19::chr7:29233961..29233972,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1124 | |EntrezGene=1124 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1944 | |HGNC=1944 | ||
|TSSclassifier=strong | |||
|UniProt=P52757 | |UniProt=P52757 | ||
|association_with_transcript=-55bp_to_ENST00000222792_5end | |association_with_transcript=-55bp_to_ENST00000222792_5end | ||
|cluster_id=chr7:29233961..29233972,+ | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_22_at_CHN2_5end | |description=CAGE_peak_22_at_CHN2_5end | ||
Latest revision as of 04:00, 18 September 2015
| Short description: | p22@CHN2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_22_at_CHN2_5end |
| Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
| Association with transcript: | -55bp_to_ENST00000222792_5end |
| EntrezGene: | CHN2 |
| HGNC: | 1944 |
| UniProt: | P52757 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p22@CHN2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| adipocyte of omentum tissue | 3.24e-12 | 3 |
| mast cell | 7.01e-08 | 5 |
| basophil mast progenitor cell | 7.01e-08 | 5 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| cerebellum | 3.84e-50 | 6 |
| rhombic lip | 3.84e-50 | 6 |
| regional part of metencephalon | 8.87e-34 | 9 |
| metencephalon | 8.87e-34 | 9 |
| future metencephalon | 8.87e-34 | 9 |
| segmental subdivision of hindbrain | 1.41e-25 | 12 |
| hindbrain | 1.41e-25 | 12 |
| presumptive hindbrain | 1.41e-25 | 12 |
| segmental subdivision of nervous system | 1.11e-23 | 13 |
| posterior neural tube | 1.20e-20 | 15 |
Showing 1 to 10 of 15 entries
