FFCP PHASE1:Hg19::chr11:47236584..47236679,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1643 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2718 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc001nef.2_5end | |||
|cluster_id=chr11:47236584..47236679,+ | |||
|description=CAGE_peak_1_at_DDB2_5end | |||
|id=chr11:47236584..47236679,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.34e-24!254;CL:0000003!1.02e-18!722;CL:0000548!1.99e-18!679;CL:0000004!1.99e-18!679;CL:0000255!1.99e-18!679;CL:0000012!2.77e-18!682;CL:0002321!5.39e-14!248;CL:0000220!2.08e-13!246;CL:0000076!9.90e-13!62;CL:0000063!4.12e-12!578;CL:0000144!1.18e-11!625;CL:0002371!3.67e-11!591;CL:0002139!7.70e-09!24;CL:0002077!1.98e-07!33;CL:0000071!2.60e-07!18;CL:0002546!2.60e-07!18;CL:0000115!4.37e-07!35;CL:0000221!6.20e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002139;8.28e-09;24!CL:0000071;2.75e-07;18!CL:0002077;4.82e-07;34!CL:0000076;9.79e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.52e-24,253;CL:0002321,4.08e-14,250;CL:0000076,5.08e-13,63;CL:0002139,7.66e-09,24;CL:0002077,1.05e-07,34;CL:0000115,2.05e-07,36;CL:0000071,2.59e-07,18;CL:0002546,2.59e-07,18;CL:0000221,3.66e-07,72 | |||
|ontology_enrichment_development_v019=CL:0002546;2.75e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!2.60e-07!18;UBERON:0004638!2.60e-07!18;UBERON:0004852!2.60e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.75e-07;18!UBERON:0001986;2.75e-07;18!UBERON:0004852;2.75e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.59e-07,18;UBERON:0001986,2.59e-07,18;UBERON:0004852,2.59e-07,18 | |||
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| |||
|short_description=p1@DDB2 | |||
}} |
Latest revision as of 04:03, 18 September 2015
Short description: | p1@DDB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DDB2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001nef.2_5end |
EntrezGene: | DDB2 |
HGNC: | 2718 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.52e-24 | 253 |
embryonic cell | 4.08e-14 | 250 |
squamous epithelial cell | 5.08e-13 | 63 |
endothelial cell of vascular tree | 7.66e-09 | 24 |
ecto-epithelial cell | 1.05e-07 | 34 |
endothelial cell | 2.05e-07 | 36 |
blood vessel endothelial cell | 2.59e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.59e-07 | 18 |
ectodermal cell | 3.66e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.59e-07 | 18 |
endothelium | 2.59e-07 | 18 |
cardiovascular system endothelium | 2.59e-07 | 18 |