FFCP PHASE1:Hg19::chr15:56035616..56035638,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=283659 | |EntrezGene=283659 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26373 | |HGNC=26373 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-328bp_to_ENST00000561292_5end | |||
|cluster_id=chr15:56035616..56035638,- | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_3_at_PRTG_5end | |||
|id=chr15:56035616..56035638,- | |||
|ontology_enrichment_celltype=CL:0002322!9.58e-23!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;8.34e-51;5!CL:0000148;6.84e-26;10!CL:0000147;9.63e-19;14!CL:0002321;1.51e-17;15!CL:0000710;2.33e-13;20!CL:0000075;4.39e-10;27!CL:0002077;8.42e-08;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.65e-51,5;CL:0000148,6.56e-26,10;CL:0000541,6.56e-26,10;CL:0000147,9.34e-19,14;CL:0000710,2.28e-13,20;CL:0000333,5.16e-11,41;CL:0000075,4.32e-10,27;CL:0002077,3.76e-08,34;CL:0000133,6.76e-08,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;2.40e-12;22!DOID:2994;2.40e-12;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.44e-12,22;DOID:2994,2.44e-12,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p3@PRTG | |||
}} | }} |
Latest revision as of 04:51, 18 September 2015
Short description: | p3@PRTG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PRTG_5end |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | -328bp_to_ENST00000561292_5end |
EntrezGene: | PRTG |
HGNC: | 26373 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.65e-51 | 5 |
melanocyte | 6.56e-26 | 10 |
melanoblast | 6.56e-26 | 10 |
pigment cell | 9.34e-19 | 14 |
neurecto-epithelial cell | 2.28e-13 | 20 |
migratory neural crest cell | 5.16e-11 | 41 |
columnar/cuboidal epithelial cell | 4.32e-10 | 27 |
ecto-epithelial cell | 3.76e-08 | 34 |
neurectodermal cell | 6.76e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.44e-12 | 22 |
germ cell cancer | 2.44e-12 | 22 |