FFCP PHASE1:Hg19::chr1:44497024..44497068,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6536 | |EntrezGene=6536 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11056 | |HGNC=11056 | ||
|TSSclassifier=strong | |||
|UniProt=P48067,B7Z589 | |UniProt=P48067,B7Z589 | ||
|association_with_transcript=0bp_to_ENST00000372306,ENST00000372310,ENST00000475075_5end | |association_with_transcript=0bp_to_ENST00000372306,ENST00000372310,ENST00000475075_5end | ||
|cluster_id=chr1:44497024..44497068,- | |||
|description=CAGE_peak_2_at_SLC6A9_5end | |description=CAGE_peak_2_at_SLC6A9_5end | ||
|id=chr1:44497024..44497068,- | |id=chr1:44497024..44497068,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0000066!1.64e-11!254;CL:0000223!1.79e-07!59;CL:0002076!4.31e-07!43 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0000066,1.90e-10,253;CL:0000223,6.79e-07,58 | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0050687!2.27e-16!143;DOID:305!1.29e-12!106;DOID:162!8.99e-10!235;DOID:14566!6.36e-09!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.01e-15,143;DOID:305,2.47e-11,106;DOID:162,4.57e-09,235;DOID:14566,3.96e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.25e-13!169;UBERON:0000925!4.25e-13!169;UBERON:0006595!4.25e-13!169;UBERON:0000475!2.17e-11!365;UBERON:0001007!3.18e-10!155;UBERON:0001555!3.18e-10!155;UBERON:0007026!3.18e-10!155;UBERON:0000077!9.38e-09!130;UBERON:0000481!1.03e-08!347;UBERON:0004921!3.20e-08!129;UBERON:0004185!3.20e-08!129;UBERON:0001048!3.67e-08!168;UBERON:0000466!1.68e-07!126 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.94e-10,160;UBERON:0000925,3.94e-10,160;UBERON:0006595,3.94e-10,160;UBERON:0001007,1.92e-07,145;UBERON:0001555,1.92e-07,145;UBERON:0007026,1.92e-07,145 | |||
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| ||
|short_description=p2@SLC6A9 | |short_description=p2@SLC6A9 | ||
}} | }} |
Latest revision as of 05:48, 18 September 2015
Short description: | p2@SLC6A9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC6A9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000372306, ENST00000372310, ENST00000475075_5end |
EntrezGene: | SLC6A9 |
HGNC: | 11056 |
UniProt: | P48067B7Z589 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.90e-10 | 253 |
endodermal cell | 6.79e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.94e-10 | 160 |
endoderm | 3.94e-10 | 160 |
presumptive endoderm | 3.94e-10 | 160 |
digestive system | 1.92e-07 | 145 |
digestive tract | 1.92e-07 | 145 |
primitive gut | 1.92e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.01e-15 | 143 |
carcinoma | 2.47e-11 | 106 |
cancer | 4.57e-09 | 235 |
disease of cellular proliferation | 3.96e-08 | 239 |