FFCP PHASE2:Hg19::chr8:41909982..41910009,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:7994 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:13013 |TSSclas...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=7994 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=13013 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=C9JJY6 | ||
|association_with_transcript=-474bp_to_ENST00000426524_5end | |association_with_transcript=-474bp_to_ENST00000426524_5end | ||
|cluster_id=chr8:41909982..41910009,- | |cluster_id=chr8:41909982..41910009,- | ||
Latest revision as of 07:00, 18 September 2015
| Short description: | p2@KAT6A |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_KAT6A_5end |
| Coexpression cluster: | C443_CD4_CD8_Natural_Eosinophils_Neutrophils_Peripheral_blood |
| Association with transcript: | -474bp_to_ENST00000426524_5end |
| EntrezGene: | KAT6A |
| HGNC: | 13013 |
| UniProt: | C9JJY6 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@KAT6A |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| leukocyte | 8.53e-63 | 136 |
| nongranular leukocyte | 8.43e-55 | 115 |
| hematopoietic stem cell | 1.71e-48 | 168 |
| hematopoietic lineage restricted progenitor cell | 1.79e-47 | 120 |
| hematopoietic cell | 5.51e-45 | 177 |
| hematopoietic oligopotent progenitor cell | 1.53e-41 | 161 |
| hematopoietic multipotent progenitor cell | 1.53e-41 | 161 |
| classical monocyte | 1.27e-33 | 42 |
| CD14-positive, CD16-negative classical monocyte | 1.27e-33 | 42 |
| mature alpha-beta T cell | 1.29e-28 | 18 |
Showing 1 to 10 of 47 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 7.08e-24 | 98 |
| blood island | 7.08e-24 | 98 |
| hemolymphoid system | 1.47e-20 | 108 |
| bone marrow | 1.11e-16 | 76 |
| immune system | 2.99e-15 | 93 |
| bone element | 7.83e-15 | 82 |
| connective tissue | 7.52e-13 | 371 |
| skeletal element | 9.15e-13 | 90 |
| skeletal system | 1.14e-10 | 100 |
| blood | 6.21e-07 | 15 |
Showing 1 to 10 of 13 entries
