FFCP PHASE1:Hg19::chr4:68829159..68829224,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=339967 | |EntrezGene=339967 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27954 | |HGNC=27954 | ||
|TSSclassifier=strong | |||
|UniProt=B5MDI9,A8KA85,Q6ZMR5 | |UniProt=B5MDI9,A8KA85,Q6ZMR5 | ||
|association_with_transcript=7bp_to_ENST00000396188,NM_001114387,NM_182606,uc003hdr.1,uc003hds.1_5end | |association_with_transcript=7bp_to_ENST00000396188,NM_001114387,NM_182606,uc003hdr.1,uc003hds.1_5end | ||
|cluster_id=chr4:68829159..68829224,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_1_at_TMPRSS11A_5end | |description=CAGE_peak_1_at_TMPRSS11A_5end | ||
|id=chr4:68829159..68829224,- | |id=chr4:68829159..68829224,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;7.88e-13;1!UBERON:0000358;2.20e-12;1!UBERON:0004874;3.64e-12;1!UBERON:0008814;4.56e-07;2!UBERON:0010056;4.56e-07;2 | |||
|ontology_enrichment_disease=DOID:1749!6.66e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000974!6.77e-16!10;UBERON:0006562!4.45e-15!11;UBERON:0000161!9.58e-14!35;UBERON:0001042!1.06e-11!10;UBERON:0009145!1.06e-11!10;UBERON:0003127!8.15e-11!2;UBERON:0000341!1.04e-10!2;UBERON:0000166!4.05e-10!21;UBERON:0004119!4.97e-10!169;UBERON:0000925!4.97e-10!169;UBERON:0006595!4.97e-10!169;UBERON:0001255!9.63e-10!2;UBERON:0001556!9.63e-10!2;UBERON:0001004!1.58e-09!72;UBERON:0000165!1.99e-09!28;UBERON:0000930!1.99e-09!28;UBERON:0000344!3.65e-09!12;UBERON:0000365!8.31e-09!5;UBERON:0003729!1.71e-08!5;UBERON:0001723!1.18e-07!3;UBERON:0001033!1.18e-07!3;UBERON:0010056!1.18e-07!3;UBERON:0005910!2.08e-07!6;UBERON:0003408!2.37e-07!10;UBERON:0001007!3.03e-07!155;UBERON:0001555!3.03e-07!155;UBERON:0007026!3.03e-07!155;UBERON:0000065!5.90e-07!53 | |ontology_enrichment_uberon=UBERON:0000974!6.77e-16!10;UBERON:0006562!4.45e-15!11;UBERON:0000161!9.58e-14!35;UBERON:0001042!1.06e-11!10;UBERON:0009145!1.06e-11!10;UBERON:0003127!8.15e-11!2;UBERON:0000341!1.04e-10!2;UBERON:0000166!4.05e-10!21;UBERON:0004119!4.97e-10!169;UBERON:0000925!4.97e-10!169;UBERON:0006595!4.97e-10!169;UBERON:0001255!9.63e-10!2;UBERON:0001556!9.63e-10!2;UBERON:0001004!1.58e-09!72;UBERON:0000165!1.99e-09!28;UBERON:0000930!1.99e-09!28;UBERON:0000344!3.65e-09!12;UBERON:0000365!8.31e-09!5;UBERON:0003729!1.71e-08!5;UBERON:0001723!1.18e-07!3;UBERON:0001033!1.18e-07!3;UBERON:0010056!1.18e-07!3;UBERON:0005910!2.08e-07!6;UBERON:0003408!2.37e-07!10;UBERON:0001007!3.03e-07!155;UBERON:0001555!3.03e-07!155;UBERON:0007026!3.03e-07!155;UBERON:0000065!5.90e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0006562;3.12e-23;2!UBERON:0003127;3.91e-23;2!UBERON:0001723;3.17e-16;3!UBERON:0001033;3.17e-16;3!UBERON:0002372;1.25e-12;1!UBERON:0001961;1.25e-12;1!UBERON:0001744;1.25e-12;1!UBERON:0001042;1.25e-12;1!UBERON:0001735;1.25e-12;1!UBERON:0005795;1.40e-12;1!UBERON:0000989;3.64e-12;1!UBERON:0000996;3.64e-12;1!UBERON:0008811;3.64e-12;1!UBERON:0000002;2.02e-08;6!UBERON:0001560;2.02e-08;6!UBERON:0003126;2.86e-07;7!UBERON:0001005;2.86e-07;7!UBERON:0000341;5.11e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,3.49e-23,2;UBERON:0006562,1.14e-16,11;UBERON:0001723,3.18e-16,3;UBERON:0001033,3.18e-16,3;UBERON:0010056,3.18e-16,3;UBERON:0002372,1.25e-12,1;UBERON:0001961,1.25e-12,1;UBERON:0001744,1.25e-12,1;UBERON:0001735,1.25e-12,1;UBERON:0000989,3.45e-12,1;UBERON:0008811,3.45e-12,1;UBERON:0006258,3.45e-12,1;UBERON:0005876,3.45e-12,1;UBERON:0004874,3.45e-12,1;UBERON:0000996,3.85e-12,1;UBERON:0001042,7.82e-11,10;UBERON:0009145,7.82e-11,10;UBERON:0000166,1.99e-08,22;UBERON:0000002,2.02e-08,6;UBERON:0001560,2.02e-08,6;UBERON:0000161,1.14e-07,36;UBERON:0003126,2.77e-07,7;UBERON:0001005,2.77e-07,7;UBERON:0000341,5.11e-07,2;UBERON:0007023,8.40e-07,114 | |||
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|short_description=p1@TMPRSS11A | |short_description=p1@TMPRSS11A | ||
}} | }} |
Latest revision as of 07:18, 18 September 2015
Short description: | p1@TMPRSS11A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMPRSS11A_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 7bp_to_ENST00000396188, NM_001114387, NM_182606, uc003hdr.1, uc003hds.1_5end |
EntrezGene: | TMPRSS11A |
HGNC: | 27954 |
UniProt: | B5MDI9A8KA85Q6ZMR5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 3.49e-23 | 2 |
pharynx | 1.14e-16 | 11 |
tongue | 3.18e-16 | 3 |
gustatory system | 3.18e-16 | 3 |
future tongue | 3.18e-16 | 3 |
tonsil | 1.25e-12 | 1 |
mucosa-associated lymphoid tissue | 1.25e-12 | 1 |
lymphoid tissue | 1.25e-12 | 1 |
tonsillar ring | 1.25e-12 | 1 |
penis | 3.45e-12 | 1 |
intromittent organ | 3.45e-12 | 1 |
lateral plate mesenchyme | 3.45e-12 | 1 |
undifferentiated genital tubercle | 3.45e-12 | 1 |
somatopleure | 3.45e-12 | 1 |
vagina | 3.85e-12 | 1 |
chordate pharynx | 7.82e-11 | 10 |
pharyngeal region of foregut | 7.82e-11 | 10 |
oral opening | 1.99e-08 | 22 |
uterine cervix | 2.02e-08 | 6 |
neck of organ | 2.02e-08 | 6 |
orifice | 1.14e-07 | 36 |
trachea | 2.77e-07 | 7 |
respiratory airway | 2.77e-07 | 7 |
throat | 5.11e-07 | 2 |
adult organism | 8.40e-07 | 114 |