Personal tools

FFCP PHASE1:Hg19::chr10:48439197..48439208,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DPIdataset=robustDPI
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=2662
|EntrezGene=2662
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=4215
|HGNC=4215
|TSSclassifier=S
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=-31bp_to_uc001jfb.2,uc009xnp.2,uc009xnq.1_5end
|association_with_transcript=-31bp_to_uc001jfb.2,uc009xnp.2,uc009xnq.1_5end
|cluster_id=chr10:48439197..48439208,-
|coexpression_cluster_id=C152
|coexpression_cluster_id=C152
|description=CAGE_peak_3_at_GDF10_5end
|description=CAGE_peak_3_at_GDF10_5end

Latest revision as of 08:28, 18 September 2015

Short description:p3@GDF10
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_3_at_GDF10_5end
Coexpression cluster:C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung
Association with transcript: -31bp_to_uc001jfb.2, uc009xnp.2, uc009xnq.1_5end
EntrezGene:GDF10
HGNC: 4215
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
2
4
6
8
10
12




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data