FFCP PHASE1:Hg19::chr10:48439197..48439208,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=2662 | |EntrezGene=2662 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=4215 | |HGNC=4215 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-31bp_to_uc001jfb.2,uc009xnp.2,uc009xnq.1_5end | |association_with_transcript=-31bp_to_uc001jfb.2,uc009xnp.2,uc009xnq.1_5end | ||
|cluster_id=chr10:48439197..48439208,- | |||
|coexpression_cluster_id=C152 | |coexpression_cluster_id=C152 | ||
|description=CAGE_peak_3_at_GDF10_5end | |description=CAGE_peak_3_at_GDF10_5end |
Latest revision as of 08:28, 18 September 2015
Short description: | p3@GDF10 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GDF10_5end |
Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
Association with transcript: | -31bp_to_uc001jfb.2, uc009xnp.2, uc009xnq.1_5end |
EntrezGene: | GDF10 |
HGNC: | 4215 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@GDF10 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 1.47e-30 | 3 |
oligodendrocyte | 1.02e-13 | 7 |
macroglial cell | 1.02e-13 | 7 |
astrocyte | 1.02e-13 | 7 |
oligodendrocyte precursor cell | 1.02e-13 | 7 |
ciliated cell | 1.40e-08 | 3 |
ciliated epithelial cell | 1.40e-08 | 3 |
multi-ciliated epithelial cell | 1.40e-08 | 3 |
non-pigmented ciliary epithelial cell | 1.40e-08 | 3 |
Showing 1 to 9 of 9 entries
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.05e-33 | 6 |
rhombic lip | 1.05e-33 | 6 |
dura mater | 3.28e-23 | 1 |
future meninx | 3.28e-23 | 1 |
ectomeninx | 3.28e-23 | 1 |
future dura mater | 3.28e-23 | 1 |
regional part of metencephalon | 9.35e-23 | 9 |
metencephalon | 9.35e-23 | 9 |
future metencephalon | 9.35e-23 | 9 |
segmental subdivision of hindbrain | 2.91e-17 | 12 |
Showing 1 to 10 of 38 entries
Ontology term | p-value | n |
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neuroectodermal tumor | 8.46e-10 | 10 |
Showing 1 to 1 of 1 entries