FFCP PHASE1:Hg19::chr17:79804916..79804933,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5034 | |EntrezGene=5034 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8548 | |HGNC=8548 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-369bp_to_ENST00000476482_5end | |association_with_transcript=-369bp_to_ENST00000476482_5end | ||
|cluster_id=chr17:79804916..79804933,- | |||
|coexpression_cluster_id=C846 | |||
|description=CAGE_peak_4_at_P4HB_5end | |description=CAGE_peak_4_at_P4HB_5end | ||
|id=chr17:79804916..79804933,- | |id=chr17:79804916..79804933,- | ||
|ontology_enrichment_celltype=CL:0000548!5.94e-21!679;CL:0000004!5.94e-21!679;CL:0000255!5.94e-21!679;CL:0000012!1.15e-19!682;CL:0002371!1.57e-17!591;CL:0000144!1.86e-17!625;CL:0000055!2.20e-13!180;CL:0000063!3.40e-12!578;CL:0000003!7.31e-12!722;CL:0000057!8.84e-12!75;CL:0000723!2.50e-11!436;CL:0000048!1.38e-10!430;CL:0000220!2.75e-10!246;CL:0000034!3.02e-10!444;CL:0002321!8.66e-10!248;CL:0000222!4.58e-08!119;CL:0000680!2.02e-07!57;CL:0000056!2.02e-07!57;CL:0000355!2.02e-07!57;CL:0000183!3.56e-07!59 | |ontology_enrichment_celltype=CL:0000548!5.94e-21!679;CL:0000004!5.94e-21!679;CL:0000255!5.94e-21!679;CL:0000012!1.15e-19!682;CL:0002371!1.57e-17!591;CL:0000144!1.86e-17!625;CL:0000055!2.20e-13!180;CL:0000063!3.40e-12!578;CL:0000003!7.31e-12!722;CL:0000057!8.84e-12!75;CL:0000723!2.50e-11!436;CL:0000048!1.38e-10!430;CL:0000220!2.75e-10!246;CL:0000034!3.02e-10!444;CL:0002321!8.66e-10!248;CL:0000222!4.58e-08!119;CL:0000680!2.02e-07!57;CL:0000056!2.02e-07!57;CL:0000355!2.02e-07!57;CL:0000183!3.56e-07!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.40e-12,76;CL:0000723,8.14e-12,433;CL:0000034,4.43e-11,441;CL:0000048,5.08e-11,427;CL:0002321,1.55e-08,250;CL:0000222,3.39e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.91e-08!14 | |ontology_enrichment_disease=DOID:2394!5.91e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;8.49e-09;14!DOID:193;7.32e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.32e-08,14;DOID:193,9.63e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0003914!4.68e-09!118;UBERON:0005256!1.56e-07!143;UBERON:0001637!1.77e-07!42;UBERON:0003509!1.77e-07!42;UBERON:0004572!1.77e-07!42;UBERON:0000926!2.37e-07!448;UBERON:0004120!2.37e-07!448;UBERON:0006603!2.37e-07!448;UBERON:0002100!2.80e-07!216;UBERON:0000490!3.10e-07!138 | |ontology_enrichment_uberon=UBERON:0003914!4.68e-09!118;UBERON:0005256!1.56e-07!143;UBERON:0001637!1.77e-07!42;UBERON:0003509!1.77e-07!42;UBERON:0004572!1.77e-07!42;UBERON:0000926!2.37e-07!448;UBERON:0004120!2.37e-07!448;UBERON:0006603!2.37e-07!448;UBERON:0002100!2.80e-07!216;UBERON:0000490!3.10e-07!138 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,3.44e-08,117;UBERON:0005256,8.04e-08,122;UBERON:0001637,5.45e-07,42;UBERON:0003509,5.45e-07,42;UBERON:0004572,5.45e-07,42 | |||
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| ||
|short_description=p4@P4HB | |short_description=p4@P4HB | ||
}} | }} |
Latest revision as of 08:36, 18 September 2015
Short description: | p4@P4HB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_P4HB_5end |
Coexpression cluster: | C846_pancreas_leiomyoma_Smooth_tenocyte_Fibroblast_Adipocyte_Hepatocyte |
Association with transcript: | -369bp_to_ENST00000476482_5end |
EntrezGene: | P4HB |
HGNC: | 8548 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.40e-12 | 76 |
somatic stem cell | 8.14e-12 | 433 |
stem cell | 4.43e-11 | 441 |
multi fate stem cell | 5.08e-11 | 427 |
embryonic cell | 1.55e-08 | 250 |
mesodermal cell | 3.39e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 3.44e-08 | 117 |
trunk mesenchyme | 8.04e-08 | 122 |
artery | 5.45e-07 | 42 |
arterial blood vessel | 5.45e-07 | 42 |
arterial system | 5.45e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.32e-08 | 14 |
reproductive organ cancer | 9.63e-07 | 29 |