FFCP PHASE1:Hg19::chr15:59908719..59908730,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:59908719..59908730,+
|short_description=p6@GCNT3
|description=CAGE_peak_6_at_GCNT3_5end
|association_with_transcript=0bp_to_ENST00000560210_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9245 | |EntrezGene=9245 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4205 | |HGNC=4205 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000560210_5end | |||
|cluster_id=chr15:59908719..59908730,+ | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_6_at_GCNT3_5end | |||
|id=chr15:59908719..59908730,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.20e-11!3;CL:1000615!1.20e-11!3;CL:0002306!1.20e-11!3;CL:0002076!1.59e-07!43;CL:1000507!2.25e-07!12;CL:1000494!2.25e-07!12;CL:0000223!3.77e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.08e-19;1!CL:0000164;1.08e-19;1!CL:0000502;1.08e-19;1!CL:0000172;1.08e-19;1!CL:0000173;1.08e-19;1!CL:0002231;2.25e-07;3!CL:0000239;2.71e-07;3!CL:1000615;2.71e-07;3!CL:0002306;2.71e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.08e-19,1;CL:0000164,1.08e-19,1;CL:0000502,1.08e-19,1;CL:0000172,1.08e-19,1;CL:0000173,1.08e-19,1;CL:0002351,1.08e-19,1;CL:0002231,2.19e-07,3;CL:0000239,2.97e-07,3;CL:1000615,2.97e-07,3;CL:0002306,2.97e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002351;1.08e-19;1!UBERON:0008801;5.13e-19;1 | |||
|ontology_enrichment_disease=DOID:299!1.54e-09!25;DOID:4468!4.75e-08!2;DOID:4929!9.26e-08!2;DOID:305!2.04e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.08e-19;1!DOID:4074;3.42e-10;2!DOID:4905;3.42e-10;2!DOID:3498;3.42e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.08e-19,1;DOID:4074,3.27e-10,2;DOID:4905,3.27e-10,2;DOID:3498,3.27e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.19e-14!169;UBERON:0000925!2.19e-14!169;UBERON:0006595!2.19e-14!169;UBERON:0004921!3.75e-13!129;UBERON:0004185!3.75e-13!129;UBERON:0001007!7.85e-12!155;UBERON:0001555!7.85e-12!155;UBERON:0007026!7.85e-12!155;UBERON:0006853!1.20e-11!3;UBERON:0007685!1.20e-11!3;UBERON:0004134!1.20e-11!3;UBERON:0006562!5.52e-11!11;UBERON:0006554!4.96e-09!44;UBERON:0001008!8.96e-09!45;UBERON:0000077!1.14e-08!130;UBERON:0001042!1.73e-08!10;UBERON:0009145!1.73e-08!10;UBERON:0005409!6.32e-08!35;UBERON:0000058!1.43e-07!26;UBERON:0009773!2.25e-07!12;UBERON:0001231!2.25e-07!12;UBERON:0004810!2.25e-07!12;UBERON:0000160!5.94e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;5.13e-19;1!UBERON:0001567;5.13e-19;1!UBERON:0003127;2.60e-10;2!UBERON:0001829;3.42e-10;2!UBERON:0004089;3.42e-10;2!UBERON:0000059;1.62e-07;11!UBERON:0006853;2.71e-07;3!UBERON:0007685;2.71e-07;3!UBERON:0004134;2.71e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,5.62e-19,1;UBERON:0001567,5.62e-19,1;UBERON:0008801,5.62e-19,1;UBERON:0003127,2.49e-10,2;UBERON:0001829,3.58e-10,2;UBERON:0004089,3.58e-10,2;UBERON:0000059,1.56e-07,11;UBERON:0006853,2.97e-07,3;UBERON:0007685,2.97e-07,3;UBERON:0004134,2.97e-07,3 | |||
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| ||
|short_description=p6@GCNT3 | |||
}} | }} |
Latest revision as of 09:09, 18 September 2015
Short description: | p6@GCNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GCNT3_5end |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | 0bp_to_ENST00000560210_5end |
EntrezGene: | GCNT3 |
HGNC: | 4205 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.08e-19 | 1 |
enteroendocrine cell | 1.08e-19 | 1 |
type D enteroendocrine cell | 1.08e-19 | 1 |
somatostatin secreting cell | 1.08e-19 | 1 |
pancreatic D cell | 1.08e-19 | 1 |
progenitor cell of endocrine pancreas | 1.08e-19 | 1 |
epithelial cell of prostate | 2.19e-07 | 3 |
brush border epithelial cell | 2.97e-07 | 3 |
kidney cortex tubule cell | 2.97e-07 | 3 |
epithelial cell of proximal tubule | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
parotid gland | 5.62e-19 | 1 |
cheek | 5.62e-19 | 1 |
parotid gland primordium | 5.62e-19 | 1 |
open tracheal system trachea | 2.49e-10 | 2 |
major salivary gland | 3.58e-10 | 2 |
midface | 3.58e-10 | 2 |
large intestine | 1.56e-07 | 11 |
renal cortex tubule | 2.97e-07 | 3 |
region of nephron tubule | 2.97e-07 | 3 |
proximal tubule | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.08e-19 | 1 |
pancreas adenocarcinoma | 3.27e-10 | 2 |
pancreatic carcinoma | 3.27e-10 | 2 |
pancreatic ductal adenocarcinoma | 3.27e-10 | 2 |