FFCP PHASE1:Hg19::chr15:59910171..59910184,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9245 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4205 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=33bp_to_ENST00000559200_5end | |||
|cluster_id=chr15:59910171..59910184,+ | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_15_at_GCNT3_5end | |||
|id=chr15:59910171..59910184,+ | |||
|ontology_enrichment_celltype=CL:0002231!1.86e-09!3;CL:0000167!2.70e-08!1;CL:0000164!2.70e-08!1;CL:0000502!2.70e-08!1;CL:0000172!2.70e-08!1;CL:0000173!2.70e-08!1;CL:0002351!2.70e-08!1;CL:0002553!4.99e-08!1 | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.07e-23;1!CL:0000164;1.07e-23;1!CL:0000502;1.07e-23;1!CL:0000172;1.07e-23;1!CL:0000173;1.07e-23;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.07e-23,1;CL:0000164,1.07e-23,1;CL:0000502,1.07e-23,1;CL:0000172,1.07e-23,1;CL:0000173,1.07e-23,1;CL:0002351,1.07e-23,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.07e-23;1!UBERON:0008801;2.34e-23;1 | |||
|ontology_enrichment_disease=DOID:4430!2.70e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.07e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.07e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0003127!1.03e-14!2;UBERON:0004119!3.50e-11!169;UBERON:0000925!3.50e-11!169;UBERON:0006595!3.50e-11!169;UBERON:0004921!5.48e-11!129;UBERON:0004185!5.48e-11!129;UBERON:0000065!1.43e-10!53;UBERON:0001723!1.06e-09!3;UBERON:0001033!1.06e-09!3;UBERON:0010056!1.06e-09!3;UBERON:0006562!1.18e-09!11;UBERON:0001004!5.43e-09!72;UBERON:0001007!1.36e-08!155;UBERON:0001555!1.36e-08!155;UBERON:0007026!1.36e-08!155;UBERON:0001831!3.32e-08!1;UBERON:0001567!3.32e-08!1;UBERON:0008801!3.32e-08!1;UBERON:0002372!4.66e-08!1;UBERON:0001961!4.66e-08!1;UBERON:0001744!4.66e-08!1;UBERON:0001735!4.66e-08!1;UBERON:0001154!8.51e-08!1;UBERON:0001153!8.51e-08!1;UBERON:0000077!4.19e-07!130;UBERON:0001155!6.16e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;5.59e-45;2!UBERON:0001831;2.34e-23;1!UBERON:0001567;2.34e-23;1!UBERON:0002372;4.59e-23;1!UBERON:0001961;4.59e-23;1!UBERON:0001744;4.59e-23;1!UBERON:0001042;4.59e-23;1!UBERON:0001735;4.59e-23;1!UBERON:0003126;1.19e-13;7!UBERON:0001005;1.19e-13;7!UBERON:0001829;2.19e-12;2!UBERON:0004089;2.19e-12;2!UBERON:0000341;3.06e-12;2!UBERON:0006562;3.06e-12;2!UBERON:0001723;1.35e-08;3!UBERON:0001033;1.35e-08;3!UBERON:0000165;1.07e-07;28!UBERON:0007196;7.31e-07;15!UBERON:0001558;7.31e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,6.26e-45,2;UBERON:0001831,2.10e-23,1;UBERON:0001567,2.10e-23,1;UBERON:0008801,2.10e-23,1;UBERON:0002372,6.40e-23,1;UBERON:0001961,6.40e-23,1;UBERON:0001744,6.40e-23,1;UBERON:0001735,6.40e-23,1;UBERON:0003126,1.23e-13,7;UBERON:0001005,1.23e-13,7;UBERON:0001829,2.07e-12,2;UBERON:0004089,2.07e-12,2;UBERON:0000341,2.59e-12,2;UBERON:0001042,1.10e-09,10;UBERON:0009145,1.10e-09,10;UBERON:0000166,1.27e-09,22;UBERON:0006562,6.88e-09,11;UBERON:0001723,1.30e-08,3;UBERON:0001033,1.30e-08,3;UBERON:0010056,1.30e-08,3;UBERON:0000072,7.27e-08,47;UBERON:0001004,1.35e-07,74;UBERON:0000165,1.91e-07,29;UBERON:0000930,1.91e-07,29;UBERON:0000065,6.94e-07,54;UBERON:0007196,7.41e-07,15;UBERON:0001558,7.41e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0,0,0,0,0,0.290967049465258,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19303106742873,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,21.1642783362685,0,27.8098325579919,0,0,0,0,0,0,0,1.2498775702396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,1.70587185520785,0,0,0,0,0,0,0.217716747896961,1.36893320434112,1.01028079521881,2.15166616178029,3.32660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p15@GCNT3 | |||
}} |
Latest revision as of 09:18, 18 September 2015
Short description: | p15@GCNT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_GCNT3_5end |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | 33bp_to_ENST00000559200_5end |
EntrezGene: | GCNT3 |
HGNC: | 4205 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.07e-23 | 1 |
enteroendocrine cell | 1.07e-23 | 1 |
type D enteroendocrine cell | 1.07e-23 | 1 |
somatostatin secreting cell | 1.07e-23 | 1 |
pancreatic D cell | 1.07e-23 | 1 |
progenitor cell of endocrine pancreas | 1.07e-23 | 1 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 6.26e-45 | 2 |
parotid gland | 2.10e-23 | 1 |
cheek | 2.10e-23 | 1 |
parotid gland primordium | 2.10e-23 | 1 |
tonsil | 6.40e-23 | 1 |
mucosa-associated lymphoid tissue | 6.40e-23 | 1 |
lymphoid tissue | 6.40e-23 | 1 |
tonsillar ring | 6.40e-23 | 1 |
trachea | 1.23e-13 | 7 |
respiratory airway | 1.23e-13 | 7 |
major salivary gland | 2.07e-12 | 2 |
midface | 2.07e-12 | 2 |
throat | 2.59e-12 | 2 |
chordate pharynx | 1.10e-09 | 10 |
pharyngeal region of foregut | 1.10e-09 | 10 |
oral opening | 1.27e-09 | 22 |
pharynx | 6.88e-09 | 11 |
tongue | 1.30e-08 | 3 |
gustatory system | 1.30e-08 | 3 |
future tongue | 1.30e-08 | 3 |
segment of respiratory tract | 7.27e-08 | 47 |
respiratory system | 1.35e-07 | 74 |
mouth | 1.91e-07 | 29 |
stomodeum | 1.91e-07 | 29 |
respiratory tract | 6.94e-07 | 54 |
tracheobronchial tree | 7.41e-07 | 15 |
lower respiratory tract | 7.41e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.07e-23 | 1 |