FFCP PHASE1:Hg19::chr3:46000146..46000161,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79443 | |EntrezGene=79443 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14673 | |HGNC=14673 | ||
|TSSclassifier=strong | |||
|UniProt=C9J2W6 | |UniProt=C9J2W6 | ||
|association_with_transcript=0bp_to_ENST00000438446_5end | |association_with_transcript=0bp_to_ENST00000438446_5end | ||
|cluster_id=chr3:46000146..46000161,- | |||
|coexpression_cluster_id=C58 | |coexpression_cluster_id=C58 | ||
|description=CAGE_peak_3_at_FYCO1_5end | |description=CAGE_peak_3_at_FYCO1_5end | ||
|id=chr3:46000146..46000161,- | |id=chr3:46000146..46000161,- | ||
|ontology_enrichment_celltype=CL:0000148!1.13e-12!10;CL:0000541!1.13e-12!10;CL:0000625!3.33e-10!11;CL:0002567!5.23e-09!3;CL:0000147!1.16e-08!14;CL:0000791!1.43e-07!18;CL:0000789!1.43e-07!18;CL:0002420!1.43e-07!18;CL:0002419!1.43e-07!18;CL:0000790!1.43e-07!18 | |ontology_enrichment_celltype=CL:0000148!1.13e-12!10;CL:0000541!1.13e-12!10;CL:0000625!3.33e-10!11;CL:0002567!5.23e-09!3;CL:0000147!1.16e-08!14;CL:0000791!1.43e-07!18;CL:0000789!1.43e-07!18;CL:0002420!1.43e-07!18;CL:0002419!1.43e-07!18;CL:0000790!1.43e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000148;2.15e-49;10!CL:0000147;3.91e-35;14!CL:0002567;1.96e-31;3!CL:0000710;2.02e-24;20!CL:0000075;6.32e-18;27!CL:0002077;1.52e-12;34!CL:0002566;1.31e-11;1!CL:0000895;4.44e-11;1!CL:0000791;7.00e-09;18!CL:0000789;7.00e-09;18!CL:0002419;7.00e-09;18!CL:0000625;1.55e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.16e-49,10;CL:0000541,2.16e-49,10;CL:0000147,3.91e-35,14;CL:0002567,1.96e-31,3;CL:0000710,2.02e-24,20;CL:0000075,6.32e-18,27;CL:0002077,4.26e-14,34;CL:0002566,1.31e-11,1;CL:0000810,4.44e-11,1;CL:0000895,4.44e-11,1;CL:0002436,4.44e-11,1;CL:0002427,4.44e-11,1;CL:0002428,4.44e-11,1;CL:0002429,4.44e-11,1;CL:0002433,4.44e-11,1;CL:0002431,4.44e-11,1;CL:0002432,4.44e-11,1;CL:0000333,5.33e-11,41;CL:0000791,6.85e-09,18;CL:0000789,6.85e-09,18;CL:0002420,6.85e-09,18;CL:0002419,6.85e-09,18;CL:0000790,6.85e-09,18;CL:0000625,1.51e-08,11;CL:0000133,1.54e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.68e-11;1!UBERON:0010227;2.68e-11;1!CL:0002427;4.44e-11;1!CL:0000790;7.00e-09;18 | |||
|ontology_enrichment_disease=DOID:0060084!3.27e-08!3;DOID:127!3.27e-08!3 | |ontology_enrichment_disease=DOID:0060084!3.27e-08!3;DOID:127!3.27e-08!3 | ||
|ontology_enrichment_disease_v019=DOID:1909;3.13e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.13e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.26e-08!115 | |ontology_enrichment_uberon=UBERON:0007023!5.26e-08!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002079;2.68e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,2.42e-11,1 | |||
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| ||
|short_description=p3@FYCO1 | |short_description=p3@FYCO1 | ||
}} | }} |
Latest revision as of 09:41, 18 September 2015
Short description: | p3@FYCO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FYCO1_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 0bp_to_ENST00000438446_5end |
EntrezGene: | FYCO1 |
HGNC: | 14673 |
UniProt: | C9J2W6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.16e-49 | 10 |
melanoblast | 2.16e-49 | 10 |
pigment cell | 3.91e-35 | 14 |
light melanocyte | 1.96e-31 | 3 |
neurecto-epithelial cell | 2.02e-24 | 20 |
columnar/cuboidal epithelial cell | 6.32e-18 | 27 |
ecto-epithelial cell | 4.26e-14 | 34 |
dark melanocyte | 1.31e-11 | 1 |
CD4-positive, alpha-beta thymocyte | 4.44e-11 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 4.44e-11 | 1 |
mature CD4 single-positive thymocyte | 4.44e-11 | 1 |
resting double-positive thymocyte | 4.44e-11 | 1 |
double-positive blast | 4.44e-11 | 1 |
CD69-positive double-positive thymocyte | 4.44e-11 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 4.44e-11 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 4.44e-11 | 1 |
CD24-positive, CD4 single-positive thymocyte | 4.44e-11 | 1 |
migratory neural crest cell | 5.33e-11 | 41 |
mature alpha-beta T cell | 6.85e-09 | 18 |
alpha-beta T cell | 6.85e-09 | 18 |
immature T cell | 6.85e-09 | 18 |
mature T cell | 6.85e-09 | 18 |
immature alpha-beta T cell | 6.85e-09 | 18 |
CD8-positive, alpha-beta T cell | 1.51e-08 | 11 |
neurectodermal cell | 1.54e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 2.42e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.13e-21 | 2 |