FFCP PHASE1:Hg19::chr19:44008915..44008933,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:44008915..44008933,-
|short_description=p2@PHLDB3
|description=CAGE_peak_2_at_PHLDB3_5end
|association_with_transcript=51bp_to_NM_198850,uc002own.3,uc002o...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=653583 | |EntrezGene=653583 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30499 | |HGNC=30499 | ||
|TSSclassifier=strong | |||
|UniProt=Q6NSJ2,Q96HZ0 | |UniProt=Q6NSJ2,Q96HZ0 | ||
|association_with_transcript=51bp_to_NM_198850,uc002own.3,uc002owo.2_5end | |||
|cluster_id=chr19:44008915..44008933,- | |||
|description=CAGE_peak_2_at_PHLDB3_5end | |||
|id=chr19:44008915..44008933,- | |||
|ontology_enrichment_celltype=CL:0000791!1.19e-09!18;CL:0000789!1.19e-09!18;CL:0002420!1.19e-09!18;CL:0002419!1.19e-09!18;CL:0000790!1.19e-09!18;CL:0000084!7.24e-08!25;CL:0000827!7.24e-08!25;CL:0000066!7.62e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.02e-14;18!CL:0000789;4.02e-14;18!CL:0002419;4.02e-14;18!CL:0000084;6.23e-12;25!CL:0000624;4.97e-09;6!CL:0000625;3.13e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.89e-14,18;CL:0000789,1.89e-14,18;CL:0002420,1.89e-14,18;CL:0002419,1.89e-14,18;CL:0000790,1.89e-14,18;CL:0000084,4.54e-12,25;CL:0000827,4.54e-12,25;CL:0000624,7.13e-09,6;CL:0000625,1.18e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;4.02e-14;18 | |||
|ontology_enrichment_disease=DOID:305!3.12e-09!106;DOID:0050687!1.63e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.30e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0005177!4.12e-07!107 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,3.29e-07,101 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.261185628199839,0.491467873003018,0.697801167972428,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0.492484232307152,0.204000691244253,0.313454721478088,0.572471974262113,0.684372125364421,0.87879847716362,0.687720651731561,0.492603536699674,0.236132343941038,1.18009283054671,0,0.154816123316076,0.919421224478927,0.30120591877825,0,0,0.142169232487422,0.293600439334847,0.553995408531877,0.601633342410425,0.434021741431704,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0.211255286311942,0.425208599930087,0.209658645508376,0,0,0,0,0,0,0,1.09227722252426,0,0.853460445133014,0.800791974072025,0,0.661044872784862,0,0,0.587237189370939,0,1.32171328579026,0.560508562981536,1.05353633910031,2.360517241366,2.75107533924415,2.67281948699362,1.83905144929746,4.23698946623668,3.78758244587787,1.94826728407911,1.11410456885174,2.06224135232386,2.43687284041983,1.89562704635511,2.17755243533648,0.520237390239513,0.986627427622057,2.48715016007264,1.73881851441031,1.92772532110679,3.21048993707656,4.18142095219907,0.679856056185397,1.14966148080576,3.09264700934367,2.02415753615602,1.59282707162048,0.651083453856419,1.90090408889675,1.95747654801105,2.04778577847069,4.99722906209383,1.4206635122641,0.821127996921047,1.20964045934839,1.60464117470104,1.15859523106239,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.087834785693126,0.654895377488563,0.364295288292542,0.370784442784429,0,0.174129737299267,0.132957960518865,0,0,0.74291500265913,0.79504962946682,0,0,0.56530794192401,0.419499436209906,0,0.417989933073621,0,0,0,0,1.52054421143703,0.488124115096339,0,0,0.0892997282840798,0.44905874525234,0.675668882899933,0,0.949265659568129,0.183201743930407,0,3.87780264148325,0.436094052142534,0,0.12663051166458,0.132409180813219,0,0,0,0,0.49333509683432,0,0.269421344139376,0,0.151357427644931,0,0.468642863667593,0,0,0,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0.336672227908132,0.125118519871964,0.277064115484183,0,0.30648779579902,0,0.113432183160021,0,0,0,0.300091096084402,0.103052529238439,0.257640540045629,0.37223371266318,0,0.0974370051611986,0.504867548488229,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0.731842236777572,0.927708378250397,0.929551542956147,1.65857688024593,0.504641701751257,1.45990943630332,0,0,0,0,0,0,0.168584690078102,0,0.220587945464788,0,0,0.134831308160164,0.588664395376038,0,0.738155454624648,0,0,0,0,1.96565443335525,0,0.441463099414651,2.58275720940538,0.343135620597051,0.109750285408626,0,0.100528972411631,0.0925884451585296,1.3032332212413,0,0,0.231860809950154,0.352226082707465,0.288732895522148,0,1.52203321787679,3.1608175918371,5.15091697256924,0,0,0,0,0,0,0.179117045405697,0,0.383382679165211,0,0.44024217006613,2.07328115540772,2.73827911492227,2.65109110195398,0.063497894292169,0,0,0,0.205654985406647,0.300343057843917,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0.224170287987055,0.985153801009636,0.646882724578552,1.02674429023799,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0.356857977594324,0.157702415033935,0,0,0,0,0,0,0.347534457872331,0.195801157462741,0.343143423810856,1.24060815673732,0.215714200818617,1.17400313583789,0.606255142892519,1.66435439510497,0.604780586659361,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,1.69203229428271,0,0.184161977871793,0.229628896329213,0,0.393373244878272,2.25599806453706,0.616122696835318,3.13739907670742,0,1.05551628892876,1.13733384070897,0.340187410553031,0.215915916102139,0,0.812839312631559,1.00337954770971,1.78413391131527,2.49322802678617,0.447749509444357,0,0,1.28225062558195,1.31205858279882,0.976135183992909,0.515205058238611,0.27470839445503,0.41254749960294,0.574265537996172,0,0,0.193341436584244,0,0,0.137836572484531,0,0,0,0.0890320356467374,0,0,0.127612712494584,0.4046311234222,0,0.31481234683064,0.6970372701606,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.359744915166629,0,0,0.202182481573316,0,0,0.48763373908959,0.243713489631284,1.05650146756755,0.272999822815972,0,0,0,0,0,0.578775534266688,0,0.202910376962704,0.30982349809975,0.845086807596724,0.143411352204052,0.0982490410131212,0,0,0.422215270595328,0.329294892959902,0,0.349934720244983,0.384888450902048,0,0,0.0941438007767792,0.43050537267123,0,1.7737206141467,0.229723400206959,1.01489521846434,0.764637207142375,0,0.238231775457789,0,1.94541993357815,1.08006287447623,1.58625035258854,1.6023610669121,2.88743956579008,0.980160863924127,0.557409525377156,0,2.84567373393656,0,0.59873811429845,0,0,0.324621940274555,0.561594356226918,0,0.156679895773023,0,0,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0,3.69262196843137,0,0,1.4098700508785,0.18714054040822,0.146508179271894,0.121360521749513,0,0,1.19372242368845,0.296964680832639,4.30024982938925,0,0.140669416410513,0.779160935160341,0,0,0.39849597650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| ||
|short_description=p2@PHLDB3 | |||
}} | }} |
Latest revision as of 11:10, 18 September 2015
Short description: | p2@PHLDB3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PHLDB3_5end |
Coexpression cluster: | NA |
Association with transcript: | 51bp_to_NM_198850, uc002own.3, uc002owo.2_5end |
EntrezGene: | PHLDB3 |
HGNC: | 30499 |
UniProt: | Q6NSJ2Q96HZ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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mature alpha-beta T cell | 1.89e-14 | 18 |
alpha-beta T cell | 1.89e-14 | 18 |
immature T cell | 1.89e-14 | 18 |
mature T cell | 1.89e-14 | 18 |
immature alpha-beta T cell | 1.89e-14 | 18 |
T cell | 4.54e-12 | 25 |
pro-T cell | 4.54e-12 | 25 |
CD4-positive, alpha-beta T cell | 7.13e-09 | 6 |
CD8-positive, alpha-beta T cell | 1.18e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 3.29e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.30e-07 | 106 |