FFCP PHASE1:Hg19::chr16:8962202..8962222,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23589 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17150 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y2V2 | |||
|association_with_transcript=25bp_to_NM_001042476,uc002czh.1_5end | |||
|cluster_id=chr16:8962202..8962222,- | |||
|description=CAGE_peak_3_at_CARHSP1_5end | |||
|id=chr16:8962202..8962222,- | |||
|ontology_enrichment_celltype=CL:0000055!1.64e-24!180;CL:0000183!1.13e-13!59;CL:0000680!2.09e-12!57;CL:0000056!2.09e-12!57;CL:0000355!2.09e-12!57;CL:0000222!2.76e-12!119;CL:0000057!3.63e-12!75;CL:0000187!6.97e-12!54;CL:0000220!7.81e-12!246;CL:0002321!1.47e-11!248;CL:0000393!5.55e-09!60;CL:0000211!5.55e-09!60;CL:0000192!1.65e-07!42;CL:0000514!1.65e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000187;1.55e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.65e-13,58;CL:0000056,1.65e-13,58;CL:0000355,1.65e-13,58;CL:0000057,5.97e-13,76;CL:0000187,7.29e-13,55;CL:0000222,7.85e-13,121;CL:0002321,1.61e-11,250;CL:0000393,5.11e-10,61;CL:0000211,5.11e-10,61;CL:0000192,1.02e-07,43;CL:0000514,1.02e-07,43 | |||
|ontology_enrichment_development_v019=CL:0000355;1.04e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!4.76e-13!143;UBERON:0000914!1.01e-12!83;UBERON:0002329!1.01e-12!83;UBERON:0003077!1.01e-12!83;UBERON:0003059!1.01e-12!83;UBERON:0007282!1.01e-12!83;UBERON:0009618!1.01e-12!83;UBERON:0007285!1.01e-12!83;UBERON:0000486!2.70e-12!82;UBERON:0004290!3.36e-12!70;UBERON:0000475!2.60e-11!365;UBERON:0001134!3.86e-11!61;UBERON:0002036!3.86e-11!61;UBERON:0003082!3.86e-11!61;UBERON:0002100!9.13e-11!216;UBERON:0002385!2.55e-10!63;UBERON:0001015!2.55e-10!63;UBERON:0000383!2.55e-10!63;UBERON:0000119!6.09e-10!312;UBERON:0000483!2.36e-09!309;UBERON:0000490!2.40e-09!138;UBERON:0003104!5.53e-07!238;UBERON:0009142!5.53e-07!238 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,4.72e-15,78;UBERON:0002329,3.36e-14,71;UBERON:0003059,3.36e-14,71;UBERON:0007282,3.36e-14,71;UBERON:0004290,3.36e-14,71;UBERON:0009618,3.36e-14,71;UBERON:0007524,1.00e-13,73;UBERON:0003077,1.02e-13,72;UBERON:0007285,1.02e-13,72;UBERON:0000486,3.35e-13,83;UBERON:0001134,1.34e-12,62;UBERON:0002036,1.34e-12,62;UBERON:0003082,1.34e-12,62;UBERON:0005256,1.67e-12,122;UBERON:0002385,1.17e-11,64;UBERON:0001015,1.17e-11,64;UBERON:0000383,1.17e-11,64;UBERON:0003104,1.59e-10,160;UBERON:0009142,1.59e-10,160;UBERON:0002100,2.27e-10,199;UBERON:0000490,3.18e-10,148;UBERON:0000119,5.66e-07,309 | |||
|phase1_expression=1.99846217197612,2.5692062866918,0.986680828671798,3.00219895059391,0.893922188854576,6.97870819280295,2.53299878168311,0.631719873426831,2.08948502559871,0.982935746006035,6.97801167972428,1.96597234917155,1.05506791291381,3.96052329472149,2.65117900582333,0,2.41077811209591,1.46062018077475,0.975865597581014,5.17108443922509,7.14002419354885,9.40364164434263,1.43117993565528,1.09499540058307,0.376627918784408,0.152826811495903,0,0.236132343941038,0.393364276848904,0,0,4.59710612239464,2.10844143144775,2.58827807116751,2.09161441566814,0.284338464974843,0.587200878669695,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0,0,0.574752439954483,0,0,0,0,0.382273228125229,0,0,1.05353633910031,0.590129310341499,0.393010762749165,0,0.83593247695339,0.651844533267181,1.89379122293893,0,0.779873198196215,0.294605907474837,0.886135578334485,0.270803863765016,0.384273959177026,0.520237390239513,0.493313713811028,0.552700035571697,0,0.296573126324121,0.535081656179426,0,0.793165398882963,0.766440987203842,0,0,0.318565414324097,1.95325036156926,1.90090408889675,1.05402583354441,0.511946444617674,0,0.947109008176067,0,0.604820229674197,0.267440195783507,0.579297615531196,2.43806866313962,10.7312137552582,15.9828202304413,0.361439152384566,1.50401373190767,1.01392563272577,0,1.94653948121054,1.22895262313288,1.77383517970051,1.05401742831751,1.44076983047484,3.64295288292542,1.11235332835329,0,0,0,0.715471872916026,1.71598473234038,0.371457501329565,0.993812036833525,0,0.347140501607594,1.13061588384802,0.419499436209906,0.275118041940067,1.46296476575767,0.516833518338658,1.06729878806013,0.33472061276467,5.23678112241891,3.04108842287405,9.27435818683044,0,0,0.625098097988558,0.673588117878509,0.225222960966644,0,3.79706263827252,2.01521918323448,0,0,3.48875241714027,0.993943903390637,1.39293562831038,0.662045904066094,2.0078563452417,2.83734705758686,2.80338800071154,3.20246987189115,0.74000264525148,1.8672662123986,3.63718814588158,3.59616186849609,9.83823279692054,8.06646294271999,2.10889288650417,1.5608003841516,1.71141546463335,1.94283284717341,1.996386476944,1.61872944368132,2.10676210053373,1.63323337003915,2.57952066354713,1.23990937410919,0,1.23633464639278,0,2.15585442544872,2.86171393721913,1.62654075833553,1.38532057742091,2.19488810440419,1.5324389789951,0.600952235626387,4.8775838758809,0.89694817844431,4.48470516518992,4.02670612203168,0.900273288253207,2.88547081867629,0.515281080091258,2.04728541964749,1.18143432568886,3.99491721160914,1.26216887122057,4.05019554026117,5.33431987502079,1.42003837006646,2.61955455391865,4.0694542154517,2.70565194428616,2.18196896472668,0.860413786167011,0.487894824518382,0.265059536642971,0.348581828608555,0.310983165046111,1.00928340350251,0.36497735907583,0,3.85944562915731,1.38134921352481,3.71494342425583,1.44375896333917,0.591534000199219,0.842923450390509,0.241011029883482,0.882351781859152,0.217879444092406,0.474541238222193,1.61797569792197,0.98110732562673,1.15424147083917,0.738155454624648,2.80483547606892,6.5851841813024,8.82052268313252,6.33775174109154,0.982827216677626,1.77236972004421,1.32438929824395,0.245976877086227,1.3725424823882,2.30475599358114,1.1240175325762,2.41269533787914,3.05541869023148,5.2129328849652,2.07986957055916,0,2.20267769452646,0.469634776943287,1.01056513432752,1.38895653772983,1.71228737011138,1.58040879591855,1.71697232418975,0.246217006087397,0.234004265139238,0.148631162288728,0,0.16798212819886,1.27597587518148,0.806026704325635,0.871901815541886,2.68367875415648,0,0.528290604079356,0,0,0.25248486685276,1.20645999155121,3.05590740446622,1.17217447210047,3.4214489204541,1.43958489784653,1.20137223137567,0,2.13049060256185,2.61576041299968,2.3468251462704,1.16344544182,25.0359512096318,0.845302752556,3.72313363218819,0,3.08648849114571,2.83698264046557,2.93064396917709,8.57867961948885,6.51145926469732,2.46972101034231,0.977208552881205,10.6617584622764,3.16780749173372,1.20575750823834,1.74306691720059,2.59929777073348,0,0,0,0.718874566474748,0,1.42636905040718,1.01346914667305,1.64381058040307,3.40215830155802,0.896681151948218,0,0.215627574859517,0.128343036279748,0.508189248444927,0,0,0.335032530668698,0,0,0,0,4.2942022101699,3.50119364741774,3.7977103317963,2.07970861530807,1.96271887676878,0.946214490203608,1.99140405487612,3.31040709700491,11.3703752027992,5.17365356462525,0.664225598535437,1.29058417979192,2.86715927744673,15.6640925970192,12.6963066810017,0.206768026122887,0,0.213455115606889,0.909382714338778,3.32870879020994,1.81434175997808,1.98486246255021,0.767309866440312,4.49056151092918,3.97231362692673,1.53512174720011,1.44768529029247,1.48418066444991,1.07946785661859,1.77561725313127,1.56041596426237,0,1.51073491997947,0,1.60405176242628,0.920809889358963,2.75554675595056,1.63882051206045,4.72047893853927,0,0.693138033939733,0.784349769176855,1.46139224653261,1.16106791782163,1.13733384070897,0.68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| |||
|short_description=p3@CARHSP1 | |||
}} |
Latest revision as of 11:52, 18 September 2015
Short description: | p3@CARHSP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CARHSP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_NM_001042476, uc002czh.1_5end |
EntrezGene: | CARHSP1 |
HGNC: | 17150 |
UniProt: | Q9Y2V2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.65e-13 | 58 |
myoblast | 1.65e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.65e-13 | 58 |
fibroblast | 5.97e-13 | 76 |
muscle cell | 7.29e-13 | 55 |
mesodermal cell | 7.85e-13 | 121 |
embryonic cell | 1.61e-11 | 250 |
electrically responsive cell | 5.11e-10 | 61 |
electrically active cell | 5.11e-10 | 61 |
smooth muscle cell | 1.02e-07 | 43 |
smooth muscle myoblast | 1.02e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 4.72e-15 | 78 |
somite | 3.36e-14 | 71 |
presomitic mesoderm | 3.36e-14 | 71 |
presumptive segmental plate | 3.36e-14 | 71 |
dermomyotome | 3.36e-14 | 71 |
trunk paraxial mesoderm | 3.36e-14 | 71 |
dense mesenchyme tissue | 1.00e-13 | 73 |
paraxial mesoderm | 1.02e-13 | 72 |
presumptive paraxial mesoderm | 1.02e-13 | 72 |
multilaminar epithelium | 3.35e-13 | 83 |
skeletal muscle tissue | 1.34e-12 | 62 |
striated muscle tissue | 1.34e-12 | 62 |
myotome | 1.34e-12 | 62 |
trunk mesenchyme | 1.67e-12 | 122 |
muscle tissue | 1.17e-11 | 64 |
musculature | 1.17e-11 | 64 |
musculature of body | 1.17e-11 | 64 |
mesenchyme | 1.59e-10 | 160 |
entire embryonic mesenchyme | 1.59e-10 | 160 |
trunk | 2.27e-10 | 199 |
unilaminar epithelium | 3.18e-10 | 148 |
cell layer | 5.66e-07 | 309 |