FFCP PHASE1:Hg19::chr16:89627312..89627347,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr16:89627312..89627347,+
|short_description=p2@RPL13
|description=CAGE_peak_2_at_RPL13_5end
|association_with_transcript=0bp_to_ENST00000399461,uc002fno.1_5en...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6137 | |EntrezGene=6137 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10303 | |HGNC=10303 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000399461,uc002fno.1_5end | |||
|cluster_id=chr16:89627312..89627347,+ | |||
|description=CAGE_peak_2_at_RPL13_5end | |||
|id=chr16:89627312..89627347,+ | |||
|ontology_enrichment_celltype=CL:0002321!8.41e-26!248;CL:0000012!1.42e-25!682;CL:0000548!1.82e-25!679;CL:0000004!1.82e-25!679;CL:0000255!1.82e-25!679;CL:0000220!2.08e-25!246;CL:0000144!3.16e-19!625;CL:0000222!4.80e-19!119;CL:0000183!1.03e-17!59;CL:0000680!3.97e-17!57;CL:0000056!3.97e-17!57;CL:0000355!3.97e-17!57;CL:0000187!1.41e-16!54;CL:0000055!2.59e-16!180;CL:0000393!4.23e-16!60;CL:0000211!4.23e-16!60;CL:0002371!2.75e-15!591;CL:0000003!5.20e-15!722;CL:0000192!4.94e-14!42;CL:0000514!4.94e-14!42;CL:0000066!1.07e-13!254;CL:0000359!3.29e-12!32;CL:0000076!5.62e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.82e-13;32!CL:0000192;1.04e-10;43!CL:0000187;2.19e-10;55!CL:0000393;9.94e-09;61!CL:0000211;9.94e-09;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.18e-25,250;CL:0000222,7.93e-21,121;CL:0000680,1.95e-18,58;CL:0000056,1.95e-18,58;CL:0000355,1.95e-18,58;CL:0000187,8.43e-18,55;CL:0000393,1.71e-17,61;CL:0000211,1.71e-17,61;CL:0000192,7.25e-15,43;CL:0000514,7.25e-15,43;CL:0000359,2.38e-13,32;CL:0000066,9.48e-11,253;CL:0000076,3.14e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000514;1.04e-10;43!CL:0000355;4.55e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!4.61e-19!70;UBERON:0000486!6.98e-19!82;UBERON:0000914!9.76e-19!83;UBERON:0002329!9.76e-19!83;UBERON:0003077!9.76e-19!83;UBERON:0003059!9.76e-19!83;UBERON:0007282!9.76e-19!83;UBERON:0009618!9.76e-19!83;UBERON:0007285!9.76e-19!83;UBERON:0005256!8.16e-16!143;UBERON:0001134!1.20e-15!61;UBERON:0002036!1.20e-15!61;UBERON:0003082!1.20e-15!61;UBERON:0003104!5.60e-15!238;UBERON:0009142!5.60e-15!238;UBERON:0002100!8.20e-15!216;UBERON:0002385!3.92e-14!63;UBERON:0001015!3.92e-14!63;UBERON:0000383!3.92e-14!63;UBERON:0002049!2.84e-13!79;UBERON:0007798!2.84e-13!79;UBERON:0001637!1.58e-12!42;UBERON:0003509!1.58e-12!42;UBERON:0004572!1.58e-12!42;UBERON:0000055!2.44e-11!69;UBERON:0001981!1.16e-10!60;UBERON:0007500!1.16e-10!60;UBERON:0004537!1.16e-10!60;UBERON:0006965!1.16e-10!60;UBERON:0000490!1.38e-10!138;UBERON:0004872!8.90e-10!84;UBERON:0004573!3.76e-09!33;UBERON:0004571!3.76e-09!33;UBERON:0003914!4.89e-09!118;UBERON:0004535!2.50e-08!110;UBERON:0001009!2.88e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.19e-10;42!UBERON:0003509;7.19e-10;42!UBERON:0004572;7.19e-10;42!UBERON:0007500;3.59e-09;56!UBERON:0001981;3.59e-09;56!UBERON:0004537;3.59e-09;56!UBERON:0004573;5.00e-09;33!UBERON:0004571;5.00e-09;33!UBERON:0002049;4.03e-08;75!UBERON:0007798;4.03e-08;75!UBERON:0003914;6.16e-08;74!UBERON:0000055;5.51e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.14e-22,78;UBERON:0002329,4.72e-20,71;UBERON:0003059,4.72e-20,71;UBERON:0007282,4.72e-20,71;UBERON:0004290,4.72e-20,71;UBERON:0009618,4.72e-20,71;UBERON:0003077,2.24e-19,72;UBERON:0007285,2.24e-19,72;UBERON:0000486,2.68e-19,83;UBERON:0007524,3.37e-19,73;UBERON:0001134,3.11e-16,62;UBERON:0002036,3.11e-16,62;UBERON:0003082,3.11e-16,62;UBERON:0002049,4.62e-15,78;UBERON:0007798,4.62e-15,78;UBERON:0002385,5.42e-15,64;UBERON:0001015,5.42e-15,64;UBERON:0000383,5.42e-15,64;UBERON:0002100,2.99e-14,199;UBERON:0000490,1.42e-13,148;UBERON:0001637,1.91e-13,42;UBERON:0003509,1.91e-13,42;UBERON:0004572,1.91e-13,42;UBERON:0003104,2.35e-13,160;UBERON:0009142,2.35e-13,160;UBERON:0005256,5.06e-13,122;UBERON:0000055,1.71e-12,68;UBERON:0007500,2.51e-12,59;UBERON:0001981,2.51e-12,59;UBERON:0004537,2.51e-12,59;UBERON:0006965,2.51e-12,59;UBERON:0004872,3.47e-10,83;UBERON:0004535,4.48e-10,109;UBERON:0004573,1.22e-09,33;UBERON:0004571,1.22e-09,33;UBERON:0001009,3.78e-09,112;UBERON:0003914,1.07e-08,117;UBERON:0000119,1.89e-08,309;UBERON:0000483,3.84e-08,306 | |||
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| ||
|short_description=p2@RPL13 | |||
}} | }} |
Latest revision as of 11:55, 18 September 2015
Short description: | p2@RPL13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPL13_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000399461, uc002fno.1_5end |
EntrezGene: | RPL13 |
HGNC: | 10303 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.18e-25 | 250 |
mesodermal cell | 7.93e-21 | 121 |
muscle precursor cell | 1.95e-18 | 58 |
myoblast | 1.95e-18 | 58 |
multi-potent skeletal muscle stem cell | 1.95e-18 | 58 |
muscle cell | 8.43e-18 | 55 |
electrically responsive cell | 1.71e-17 | 61 |
electrically active cell | 1.71e-17 | 61 |
smooth muscle cell | 7.25e-15 | 43 |
smooth muscle myoblast | 7.25e-15 | 43 |
vascular associated smooth muscle cell | 2.38e-13 | 32 |
epithelial cell | 9.48e-11 | 253 |
squamous epithelial cell | 3.14e-07 | 63 |