FFCP PHASE1:Hg19::chr11:5959840..5959857,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:5959840..5959857,-
|short_description=p4@TRIM5
|description=CAGE_peak_4_at_TRIM5_5end
|association_with_transcript=0bp_to_ENST00000412903,uc001mbq.1_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=85363 | |EntrezGene=85363 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16276 | |HGNC=16276 | ||
|UniProt=E7EQQ5, | |TSSclassifier=strong | ||
|UniProt=E7EQQ5,Q05CU3 | |||
|association_with_transcript=0bp_to_ENST00000412903,uc001mbq.1_5end | |||
|cluster_id=chr11:5959840..5959857,- | |||
|description=CAGE_peak_4_at_TRIM5_5end | |||
|id=chr11:5959840..5959857,- | |||
|ontology_enrichment_celltype=CL:0002541!1.39e-09!3;CL:0000054!1.60e-07!2;CL:0000137!1.60e-07!2;CL:0000092!1.60e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000054;2.86e-19;2!CL:0000137;2.86e-19;2!CL:0000092;2.86e-19;2!CL:0000319;3.29e-10;1!CL:0002149;2.95e-07;6!CL:0002255;2.95e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,2.17e-19,2;CL:0000137,2.17e-19,2;CL:0000092,2.17e-19,2;CL:0000319,2.28e-10,1;CL:0002149,2.95e-07,6;CL:0002255,2.95e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.29e-10;1!UBERON:0005795;6.32e-09;10 | |||
|ontology_enrichment_disease=DOID:200!1.60e-07!2;DOID:4305!1.60e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:200;2.86e-19;2!DOID:4305;2.86e-19;2!DOID:0060085;8.14e-11;1!DOID:3165;8.14e-11;1!DOID:0060121;8.14e-11;1!DOID:2438;8.14e-11;1!DOID:4418;8.14e-11;1!DOID:3030;3.29e-10;1!DOID:3001;2.95e-07;6!DOID:201;5.10e-07;6!DOID:0060100;5.10e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:200,2.17e-19,2;DOID:4305,2.17e-19,2;DOID:0060085,8.14e-11,1;DOID:3165,8.14e-11,1;DOID:0060121,8.14e-11,1;DOID:2438,8.14e-11,1;DOID:4418,8.14e-11,1;DOID:3030,2.28e-10,1;DOID:3001,2.95e-07,6;DOID:0050687,3.07e-07,143;DOID:201,4.66e-07,6;DOID:0060100,4.66e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.15e-10!115;UBERON:0000476!1.39e-09!3;UBERON:0000920!1.39e-09!3;UBERON:0001049!4.50e-07!57;UBERON:0005068!4.50e-07!57;UBERON:0006241!4.50e-07!57;UBERON:0007135!4.50e-07!57;UBERON:0003124!4.54e-07!7;UBERON:0003127!5.56e-07!2;UBERON:0002616!9.82e-07!59;UBERON:0003075!9.89e-07!86;UBERON:0007284!9.89e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p4@TRIM5 | |||
}} | }} |
Latest revision as of 12:48, 18 September 2015
Short description: | p4@TRIM5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRIM5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000412903, uc001mbq.1_5end |
EntrezGene: | TRIM5 |
HGNC: | 16276 |
UniProt: | E7EQQ5Q05CU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 2.17e-19 | 2 |
osteocyte | 2.17e-19 | 2 |
osteoclast | 2.17e-19 | 2 |
mucus secreting cell | 2.28e-10 | 1 |
epithelial cell of uterus | 2.95e-07 | 6 |
stromal cell of endometrium | 2.95e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
giant cell tumor | 2.17e-19 | 2 |
bone giant cell tumor | 2.17e-19 | 2 |
organ system benign neoplasm | 8.14e-11 | 1 |
skin benign neoplasm | 8.14e-11 | 1 |
integumentary system benign neoplasm | 8.14e-11 | 1 |
dermis tumor | 8.14e-11 | 1 |
cutaneous fibrous histiocytoma | 8.14e-11 | 1 |
mucinous adenocarcinoma | 2.28e-10 | 1 |
female reproductive endometrioid cancer | 2.95e-07 | 6 |
cell type cancer | 3.07e-07 | 143 |
connective tissue cancer | 4.66e-07 | 6 |
musculoskeletal system cancer | 4.66e-07 | 6 |