FFCP PHASE1:Hg19::chr21:42688686..42688769,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54097 | |EntrezGene=54097 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1253 | |HGNC=1253 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000398647,ENST00000398652_5end | |association_with_transcript=0bp_to_ENST00000398647,ENST00000398652_5end | ||
|cluster_id=chr21:42688686..42688769,+ | |||
|coexpression_cluster_id=C1352 | |||
|description=CAGE_peak_1_at_FAM3B_5end | |description=CAGE_peak_1_at_FAM3B_5end | ||
|id=chr21:42688686..42688769,+ | |id=chr21:42688686..42688769,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006595;5.17e-09;86 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.78e-41!115;UBERON:0001049!3.08e-11!57;UBERON:0005068!3.08e-11!57;UBERON:0006241!3.08e-11!57;UBERON:0007135!3.08e-11!57;UBERON:0000922!4.14e-11!612;UBERON:0000062!8.41e-11!511;UBERON:0000468!1.46e-09!659;UBERON:0001017!1.18e-08!82;UBERON:0002050!2.11e-08!605;UBERON:0005423!2.11e-08!605;UBERON:0002616!2.35e-08!59;UBERON:0005743!2.54e-08!86;UBERON:0000923!4.78e-08!604;UBERON:0005291!4.78e-08!604;UBERON:0006598!4.78e-08!604;UBERON:0002532!4.78e-08!604;UBERON:0003080!1.44e-07!42;UBERON:0000467!2.37e-07!625;UBERON:0004921!2.53e-07!129;UBERON:0004185!2.53e-07!129;UBERON:0000480!2.81e-07!626;UBERON:0003075!3.95e-07!86;UBERON:0007284!3.95e-07!86;UBERON:0002780!5.70e-07!41;UBERON:0001890!5.70e-07!41;UBERON:0006240!5.70e-07!41;UBERON:0002346!7.25e-07!90;UBERON:0002298!7.57e-07!8 | |ontology_enrichment_uberon=UBERON:0007023!3.78e-41!115;UBERON:0001049!3.08e-11!57;UBERON:0005068!3.08e-11!57;UBERON:0006241!3.08e-11!57;UBERON:0007135!3.08e-11!57;UBERON:0000922!4.14e-11!612;UBERON:0000062!8.41e-11!511;UBERON:0000468!1.46e-09!659;UBERON:0001017!1.18e-08!82;UBERON:0002050!2.11e-08!605;UBERON:0005423!2.11e-08!605;UBERON:0002616!2.35e-08!59;UBERON:0005743!2.54e-08!86;UBERON:0000923!4.78e-08!604;UBERON:0005291!4.78e-08!604;UBERON:0006598!4.78e-08!604;UBERON:0002532!4.78e-08!604;UBERON:0003080!1.44e-07!42;UBERON:0000467!2.37e-07!625;UBERON:0004921!2.53e-07!129;UBERON:0004185!2.53e-07!129;UBERON:0000480!2.81e-07!626;UBERON:0003075!3.95e-07!86;UBERON:0007284!3.95e-07!86;UBERON:0002780!5.70e-07!41;UBERON:0001890!5.70e-07!41;UBERON:0006240!5.70e-07!41;UBERON:0002346!7.25e-07!90;UBERON:0002298!7.57e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;2.22e-11;33!UBERON:0005409;5.42e-09;22!UBERON:0000160;5.31e-08;17!UBERON:0006947;1.04e-07;3!UBERON:0004054;1.04e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.12e-15,114;UBERON:0004921,5.98e-14,118;UBERON:0001007,8.74e-13,145;UBERON:0001555,8.74e-13,145;UBERON:0007026,8.74e-13,145;UBERON:0004119,2.15e-11,160;UBERON:0000925,2.15e-11,160;UBERON:0006595,2.15e-11,160;UBERON:0000160,5.34e-08,17;UBERON:0006947,1.04e-07,3;UBERON:0004054,1.04e-07,3;UBERON:0005409,1.19e-07,25;UBERON:0005177,1.42e-07,101;UBERON:0001041,1.58e-07,87 | |||
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| ||
|short_description=p1@FAM3B | |short_description=p1@FAM3B | ||
}} | }} |
Latest revision as of 12:53, 18 September 2015
Short description: | p1@FAM3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM3B_5end |
Coexpression cluster: | C1352_pancreas_salivary_small_submaxillary_parotid_nonsmall_smallcell |
Association with transcript: | 0bp_to_ENST00000398647, ENST00000398652_5end |
EntrezGene: | FAM3B |
HGNC: | 1253 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.12e-15 | 114 |
subdivision of digestive tract | 5.98e-14 | 118 |
digestive system | 8.74e-13 | 145 |
digestive tract | 8.74e-13 | 145 |
primitive gut | 8.74e-13 | 145 |
endoderm-derived structure | 2.15e-11 | 160 |
endoderm | 2.15e-11 | 160 |
presumptive endoderm | 2.15e-11 | 160 |
intestine | 5.34e-08 | 17 |
male genital duct | 1.04e-07 | 3 |
internal male genitalia | 1.04e-07 | 3 |
gastrointestinal system | 1.19e-07 | 25 |
trunk region element | 1.42e-07 | 101 |
foregut | 1.58e-07 | 87 |