FFCP PHASE1:Hg19::chr21:42688686..42688769,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:42688686..42688769,+ to FFCP PHASE1:Hg19::chr21:42688686..42688769,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54097 | |EntrezGene=54097 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1253 | |HGNC=1253 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000398647,ENST00000398652_5end | |||
|cluster_id=chr21:42688686..42688769,+ | |||
|coexpression_cluster_id=C1352 | |||
|description=CAGE_peak_1_at_FAM3B_5end | |||
|id=chr21:42688686..42688769,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006595;5.17e-09;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.78e-41!115;UBERON:0001049!3.08e-11!57;UBERON:0005068!3.08e-11!57;UBERON:0006241!3.08e-11!57;UBERON:0007135!3.08e-11!57;UBERON:0000922!4.14e-11!612;UBERON:0000062!8.41e-11!511;UBERON:0000468!1.46e-09!659;UBERON:0001017!1.18e-08!82;UBERON:0002050!2.11e-08!605;UBERON:0005423!2.11e-08!605;UBERON:0002616!2.35e-08!59;UBERON:0005743!2.54e-08!86;UBERON:0000923!4.78e-08!604;UBERON:0005291!4.78e-08!604;UBERON:0006598!4.78e-08!604;UBERON:0002532!4.78e-08!604;UBERON:0003080!1.44e-07!42;UBERON:0000467!2.37e-07!625;UBERON:0004921!2.53e-07!129;UBERON:0004185!2.53e-07!129;UBERON:0000480!2.81e-07!626;UBERON:0003075!3.95e-07!86;UBERON:0007284!3.95e-07!86;UBERON:0002780!5.70e-07!41;UBERON:0001890!5.70e-07!41;UBERON:0006240!5.70e-07!41;UBERON:0002346!7.25e-07!90;UBERON:0002298!7.57e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;2.22e-11;33!UBERON:0005409;5.42e-09;22!UBERON:0000160;5.31e-08;17!UBERON:0006947;1.04e-07;3!UBERON:0004054;1.04e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.12e-15,114;UBERON:0004921,5.98e-14,118;UBERON:0001007,8.74e-13,145;UBERON:0001555,8.74e-13,145;UBERON:0007026,8.74e-13,145;UBERON:0004119,2.15e-11,160;UBERON:0000925,2.15e-11,160;UBERON:0006595,2.15e-11,160;UBERON:0000160,5.34e-08,17;UBERON:0006947,1.04e-07,3;UBERON:0004054,1.04e-07,3;UBERON:0005409,1.19e-07,25;UBERON:0005177,1.42e-07,101;UBERON:0001041,1.58e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,3.44027511102112,2.79120467188971,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,3.13481663935894,0.32389366601898,0,0,0.377875943688809,0.242584061187816,0,2.05583944010913,0.309706370895104,0,0.512321413058201,0,0,1.93645405075148,0,0.188242339542605,1.91034305040492,0,0,1.60464513538047,0,0,0.997318288108159,0,0,0.56738522469114,1.24564449799115,0,3.12889751052121,0,3.02699751316684,1.10483290796269,0.316462387440884,0,0,2.09658645508376,0,0.150176892841506,1.76798145366788,0,0,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88153966094968,0,0,0,0,0.664789802594326,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34171076742555,1.06023814657188,1.2781333715647,0.725627385107593,1.51392510525377,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4057398011994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.76812917713084,0,0,0,0,0,1.80479845162965,3.15762882128101,0,0,0.105551628892876,0,0,0,0,0,0,2.54876273045038,10.8039881160734,0,0,0,0,0,0,13.7044545491471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,13.5567073118562,0,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0.79312517629427,0,0,13.4772118789567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0.211125408127993,2.78947183551498,12.4327761989016,4.03092396566842,0,0,0,0,0,0,17.6571696090111,0,0,0,0.278304294485554,0,0,0,3.62499787717397,0,0,0,1.37897349296586,0,0.520874984799877,0.885741385813839,0.120596438625408,0,0.110579259931225,0.295547618953547,0.658156191461918,0,0,4.30921447621264,0,0,0,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,4.24059214301822,0,5.97157158647103,104.026095855927,22.6081153625441,0,0,0,0.67401132980677,0,0,0,0,0,77.7331273613299,81.0637797526048,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,25.6848202315784,0,0,0,0,14.2573854237977,0,5.87549926029384,0,0,0.0633107959558787,6.6487470129833,0,17.9300515581056,0,0.576361668616424,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0.558564802544508,0,0.717873024576814,0,0,0,0.0671834724867263,0,13.9795139432945,5.75117230842733,5.68669422830049,4.24642326281365,0,0,0,0.136203406111576,4.50108815702054,2.33817042215297,3.73896304226267,18.6728329987745,1.5476039091159,0.121499113316049,0,10.9539933145885,10.2286446863246,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.879313402068495,11.9256200020999,0.387848869084652,0.39669780522807,0,0,6.0868825163586,3.14408610199332,4.55662960881915,1.48849806543585,0,0,0,0,0,0,0,20.5740866087807,0,0,0.250381861413,0.573409195690071,0.887432412294818,0.248385611765534,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0.531459361253452,1.96278473107013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,123.287895235962,0,0,0.0642292250964595,1.41696576325585,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,1.50420656698514,0.20170506870352,282.908072066379,0,0,0.443568258651136,0.270150338473579,0,0,0.0634158101939068,0,108.555037837722,3.96968942711435,0,0,0,0,1.82089681270989,2.73194629621557,18.4500929938289,0,0,0.339848664884159,0.131545547125698,0.354581522651905,0.222462803784138,15.8556047558038,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,182.846627498618,0,0,94.8386992427681,3.2074961596167,0,0,0,12.5632299027511,0,0,0,0,1.45713297917742,0,0.198950775161368,0,0.45178432815584,0,58.1206947731693,217.939822496836,1.5299169235277,115.698054904935,3.92237314806249,1.41405928260976,0.196308467114945,0.297046400327086,0.4226557275834,0,0.845855261818682,0.386747327841463,0,0,0,0,71.5729660481587,133.948950754126,0.430018749454354,0,0.203974470572744,0,52.90268405154,0,0.462175628631418,0,0,0,0,0.509944148709909,1.87052183685892,0,0,0.833565680400634,0.535928260312357,0,0.20686599172379,26.0145457919197,4.28515976634733,4.06910131966838,3.66240814345562,0,9.29248510861207,2.22328907854041,15.2401723527873,13.6893320434112,42.8359057172777,23.3097167526198,9.31448998328838,0,0,0,0,4.69281884806909,0.122241444182866,2.03448089157869,4.66029741929859,1.00636896795513,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,3.44027511102112,2.79120467188971,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,3.13481663935894,0.32389366601898,0,0,0.377875943688809,0.242584061187816,0,2.05583944010913,0.309706370895104,0,0.512321413058201,0,0,1.93645405075148,0,0.188242339542605,1.91034305040492,0,0,1.60464513538047,0,0,0.997318288108159,0,0,0.56738522469114,1.24564449799115,0,3.12889751052121,0,3.02699751316684,1.10483290796269,0.316462387440884,0,0,2.09658645508376,0,0.150176892841506,1.76798145366788,0,0,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88153966094968,0,0,0,0,0.664789802594326,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34171076742555,1.06023814657188,1.2781333715647,0.725627385107593,1.51392510525377,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4057398011994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.76812917713084,0,0,0,0,0,1.80479845162965,3.15762882128101,0,0,0.105551628892876,0,0,0,0,0,0,2.54876273045038,10.8039881160734,0,0,0,0,0,0,13.7044545491471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,13.5567073118562,0,0,0.886860307073351,0.229723400206959,0,0,0,0,0,0,0,0.79312517629427,0,0,13.4772118789567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0.211125408127993,2.78947183551498,12.4327761989016,4.03092396566842,0,0,0,0,0,0,17.6571696090111,0,0,0,0.278304294485554,0,0,0,3.62499787717397,0,0,0,1.37897349296586,0,0.520874984799877,0.885741385813839,0.120596438625408,0,0.110579259931225,0.295547618953547,0.658156191461918,0,0,4.30921447621264,0,0,0,0.108647371922008,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,4.24059214301822,0,5.97157158647103,104.026095855927,22.6081153625441,0,0,0,0.67401132980677,0,0,0,0,0,77.7331273613299,81.0637797526048,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,25.6848202315784,0,0,0,0,14.2573854237977,0,5.87549926029384,0,0,0.0633107959558787,6.6487470129833,0,17.9300515581056,0,0.576361668616424,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,0.558564802544508,0,0.717873024576814,0,0,0,0.0671834724867263,0,13.9795139432945,5.75117230842733,5.68669422830049,4.24642326281365,0,0,0,0.136203406111576,4.50108815702054,2.33817042215297,3.73896304226267,18.6728329987745,1.5476039091159,0.121499113316049,0,10.9539933145885,10.2286446863246,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.879313402068495,11.9256200020999,0.387848869084652,0.39669780522807,0,0,6.0868825163586,3.14408610199332,4.55662960881915,1.48849806543585,0,0,0,0,0,0,0,20.5740866087807,0,0,0.250381861413,0.573409195690071,0.887432412294818,0.248385611765534,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0.531459361253452,1.96278473107013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,123.287895235962,0,0,0.0642292250964595,1.41696576325585,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,1.50420656698514,0.20170506870352,282.908072066379,0,0,0.443568258651136,0.270150338473579,0,0,0.0634158101939068,0,108.555037837722,3.96968942711435,0,0,0,0,1.82089681270989,2.73194629621557,18.4500929938289,0,0,0.339848664884159,0.131545547125698,0.354581522651905,0.222462803784138,15.8556047558038,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,182.846627498618,0,0,94.8386992427681,3.2074961596167,0,0,0,12.5632299027511,0,0,0,0,1.45713297917742,0,0.198950775161368,0,0.45178432815584,0,58.1206947731693,217.939822496836,1.5299169235277,115.698054904935,3.92237314806249,1.41405928260976,0.196308467114945,0.297046400327086,0.4226557275834,0,0.845855261818682,0.386747327841463,0,0,0,0,71.5729660481587,133.948950754126,0.430018749454354,0,0.203974470572744,0,52.90268405154,0,0.462175628631418,0,0,0,0,0.509944148709909,1.87052183685892,0,0,0.833565680400634,0.535928260312357,0,0.20686599172379,26.0145457919197,4.28515976634733,4.06910131966838,3.66240814345562,0,9.29248510861207,2.22328907854041,15.2401723527873,13.6893320434112,42.8359057172777,23.3097167526198,9.31448998328838,0,0,0,0,4.69281884806909,0.122241444182866,2.03448089157869,4.66029741929859,1.00636896795513,0 | ||
|short_description=p1@FAM3B | |||
}} | }} |
Latest revision as of 12:53, 18 September 2015
Short description: | p1@FAM3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM3B_5end |
Coexpression cluster: | C1352_pancreas_salivary_small_submaxillary_parotid_nonsmall_smallcell |
Association with transcript: | 0bp_to_ENST00000398647, ENST00000398652_5end |
EntrezGene: | FAM3B |
HGNC: | 1253 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.12e-15 | 114 |
subdivision of digestive tract | 5.98e-14 | 118 |
digestive system | 8.74e-13 | 145 |
digestive tract | 8.74e-13 | 145 |
primitive gut | 8.74e-13 | 145 |
endoderm-derived structure | 2.15e-11 | 160 |
endoderm | 2.15e-11 | 160 |
presumptive endoderm | 2.15e-11 | 160 |
intestine | 5.34e-08 | 17 |
male genital duct | 1.04e-07 | 3 |
internal male genitalia | 1.04e-07 | 3 |
gastrointestinal system | 1.19e-07 | 25 |
trunk region element | 1.42e-07 | 101 |
foregut | 1.58e-07 | 87 |