FFCP PHASE1:Hg19::chr21:44495967..44495999,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr21:44495967..44495999,-
|short_description=p2@CBS
|description=CAGE_peak_2_at_CBS_5end
|association_with_transcript=0bp_to_ENST00000465732_5end
|EntrezGene=...") |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=875 | |EntrezGene=875 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1550 | |HGNC=1550 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000465732_5end | |||
|cluster_id=chr21:44495967..44495999,- | |||
|description=CAGE_peak_2_at_CBS_5end | |||
|id=chr21:44495967..44495999,- | |||
|ontology_enrichment_celltype=CL:0000055!3.33e-14!180;CL:0000066!3.73e-09!254;CL:0000057!5.98e-09!75;CL:0000133!4.41e-07!59;CL:0002321!7.55e-07!248 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.26e-09,76;CL:0000066,1.36e-08,253;CL:0000133,4.43e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!4.82e-10!143;DOID:162!8.55e-10!235;DOID:14566!1.27e-09!239 | |||
|ontology_enrichment_disease_v019=DOID:3095;7.65e-07;22!DOID:2994;7.65e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.03e-10,143;DOID:162,2.72e-10,235;DOID:14566,4.19e-10,239;DOID:3095,6.50e-07,22;DOID:2994,6.50e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000475!1.02e-08!365;UBERON:0000119!1.37e-07!312;UBERON:0000483!2.00e-07!309;UBERON:0000466!3.11e-07!126;UBERON:0000464!9.57e-07!104;UBERON:0000468!9.78e-07!659 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,3.32e-07,309;UBERON:0000483,4.81e-07,306 | |||
|phase1_expression=7.99384868790449,5.56661362116556,7.61153782118244,6.00439790118782,7.59833860526389,6.97870819280295,7.59899634504932,1.89515962028049,2.35067065379855,2.45733936501509,15.3516256953934,2.40285509343189,5.80287352102598,1.48519623552056,0.994192127183747,0,2.41077811209591,4.38186054232424,1.95173119516203,2.09305798730539,4.89601658986207,12.8516435806016,4.00730381983479,6.15934912827979,4.6450776650077,0.229240217243854,0,0.0787107813136792,0,0,0,1.83884244895785,6.024118375565,8.8740962440029,0,10.9470309015315,0,0.553995408531877,0,0,3.13481663935894,1.29557466407592,1.28787783817093,0,0,0,0.232429036905685,0,0,0.575384784644301,0.256160706529101,0.236482229888585,0,0,0,0.376484679085209,0.272906150057846,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,7.92747883429888,6.14446559053763,9.02408239144601,9.27017721349272,1.5905718941022,4.86634870302636,1.41802225746102,1.99556457716308,1.93236528524877,1.17881167947941,17.486173838042,5.56176664176644,3.57002133020152,4.35324343248168,2.92507513141503,0,0,0,6.75792185046797,3.4409383804245,3.12426451446835,1.69592382577203,1.67799774483962,6.60283300656162,1.8809546988313,0,0,0,0.805658634218294,0.760272105718513,3.41686880567437,1.83831540172934,1.62028389576352,2.58969212023831,1.12264686313085,2.59006405111641,4.5994991239765,4.74632829784064,8.06087673293792,1.31780417436063,0,6.54141078213801,8.94549513051573,5.69837302490609,7.28250494472703,12.9076479336966,4.61068896857864,9.53151920241922,10.6748995729705,15.0467204534468,1.55605517699883,10.5074324214357,2.61539044981534,2.4217188423189,1.72852777344,18.9800359785375,2.49728061464256,9.12754914471119,8.36912611090086,7.86811140913225,10.0361225508242,5.89893388149444,3.0623125688234,5.28187564440602,9.19599452464312,3.56400857184616,9.39614331258516,8.19145225744224,15.8095991199572,5.21841953257605,6.75640007308606,0.831192346452549,3.07284334616587,10.7270728529657,7.81237906314303,5.67160915800105,5.38168907066586,7.68806599746843,6.56988893594642,10.2030972668697,5.46178404963726,14.4278702425552,8.74749224758472,7.25738228637445,7.50264939741229,13.6314238091822,7.82424138459544,4.68773564774555,5.68015348026583,2.72030665214629,3.22165125389926,0.193260853163297,0.818238361772504,0.573609190778008,14.2709236171627,10.9999707706833,9.76029120103954,6.84162963101445,9.08355063152262,9.12443397689575,1.56449532329816,1.28648187638577,1.38134921352481,0.464367928031979,2.88751792667834,2.48444280083672,2.69735504124963,3.61516544825223,2.97793726377464,3.4860711054785,3.08451804844426,3.10112008768378,1.56977172100277,4.61696588335668,0.738155454624648,9.81692416624121,6.173610169971,8.82052268313252,2.53510069643662,7.86261773342101,8.27105869353966,0.882926198829301,3.07471096357784,1.71567810298526,3.29250856225877,14.6122279234905,6.03173834469785,2.77765335475589,10.4258657699304,10.3993478527958,4.3299402607582,0.695582429850461,6.92711295991348,1.15493158208859,0.462985512576611,0.570762456703795,2.37061319387782,8.58486162094873,2.95460407304877,2.57404691653161,2.0808362720422,0,0.335964256397719,0.567100388969546,10.2992301108276,3.48760726216754,14.568541808278,0,0.44024217006613,0,0,0,0.507983154337352,6.49380323449072,2.34434894420094,5.13217338068116,3.39330725920968,0,0.285826432630578,4.59737445815979,9.15516144549888,2.0534720029866,6.72212921940444,21.4593867511129,2.535908257668,9.57377219705534,6.24044621468197,3.08648849114571,4.25547396069835,5.06202140130589,5.7191197463259,7.05408087008876,7.40916303102692,1.62868092146868,5.68627117988073,0.791951872933429,0,2.61460037580088,2.39935178836937,0,0.502257091432126,4.21667878966063,8.38686994220539,12.6348129417525,0,0.723906533337896,0.61642896765115,0.358121926479791,0,0,0,0,3.81141936333695,2.60279707715243,3.09315525111078,2.17771144934653,7.01732626818479,0,0,0.414415513436035,1.2269149171914,1.50051156317903,6.51036056879365,12.6862225533792,12.133171238207,15.9279439184274,10.0741616893733,7.52365249319297,13.6444502433591,13.4514992680256,4.64957918974806,11.0621501125022,2.69339204851057,3.72022199179207,4.11772108573027,0,0,0,2.12189300012382,6.65741758041988,13.0027826131763,9.42809669711352,11.5096479966047,12.9103643439214,5.89440086576224,6.14048698880044,8.20354997832398,5.93672265779964,1.54209693802656,7.10246901252508,2.29956036838666,1.03850885836724,1.62694529843943,2.05461064305758,0.40101294060657,7.09023614806402,7.11849578620562,6.3731908802351,8.65421138732199,20.7551821937409,6.00719629414435,21.9617935369519,16.0753147118587,2.42768746453614,3.4120015221269,2.38131187387122,3.02282282542995,3.08454505380579,7.58650025122788,13.0439341202262,7.39141191830611,13.2972161428596,10.7459882266646,0.877039506583738,1.8300481571743,2.56450125116389,6.23227826829441,7.80908147194327,4.22468147755661,13.0944334690231,11.4688204889617,8.039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|short_description=p2@CBS | |||
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Latest revision as of 15:47, 18 September 2015
Short description: | p2@CBS |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CBS_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000465732_5end |
EntrezGene: | CBS |
HGNC: | 1550 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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fibroblast | 3.26e-09 | 76 |
epithelial cell | 1.36e-08 | 253 |
neurectodermal cell | 4.43e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cell layer | 3.32e-07 | 309 |
epithelium | 4.81e-07 | 306 |
Ontology term | p-value | n |
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cell type cancer | 1.03e-10 | 143 |
cancer | 2.72e-10 | 235 |
disease of cellular proliferation | 4.19e-10 | 239 |
germ cell and embryonal cancer | 6.50e-07 | 22 |
germ cell cancer | 6.50e-07 | 22 |