FFCP PHASE1:Hg19::chr15:66994615..66994630,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:66994615..66994630,+ to FFCP PHASE1:Hg19::chr15:66994615..66994630,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4091 | |EntrezGene=4091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6772 | |HGNC=6772 | ||
|TSSclassifier=strong | |||
|UniProt=O43541 | |UniProt=O43541 | ||
|association_with_transcript=-39bp_to_ENST00000288840_5end | |||
|cluster_id=chr15:66994615..66994630,+ | |||
|coexpression_cluster_id=C3505 | |||
|description=CAGE_peak_3_at_SMAD6_5end | |||
|id=chr15:66994615..66994630,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000153;8.83e-07;9!CL:0000447;8.83e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,5.32e-07,9;CL:0000447,5.32e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!6.70e-11!286;UBERON:0000481!1.54e-10!347;UBERON:0000468!2.51e-09!659;UBERON:0000062!1.14e-08!511;UBERON:0000025!1.28e-08!194;UBERON:0002346!5.00e-08!90;UBERON:0003075!1.82e-07!86;UBERON:0007284!1.82e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,5.59e-07,24;UBERON:0005498,5.59e-07,24;UBERON:0004140,5.59e-07,24;UBERON:0009881,5.59e-07,24;UBERON:0004141,5.59e-07,24;UBERON:0003084,5.59e-07,24;UBERON:0007005,5.59e-07,24;UBERON:0004139,5.59e-07,24;UBERON:0004291,5.59e-07,24;UBERON:0007625,7.57e-07,11 | |||
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|phase1_expression=2.18014055124668,1.49870366723688,3.10099689011137,1.0007329835313,3.12872766099101,0,0,0.631719873426831,0.783556884599516,0.737201809504527,1.39560233594486,0.436882744260345,0,1.23766352960047,0.331397375727916,0,0,0.730310090387373,0,0.369363174230364,1.83600622119828,1.88072832886853,1.43117993565528,1.64249310087461,1.00434111675842,0,0,0,0,0,0.928896739896456,0,0,0,0,0,0,0,0.401088894940283,0,0,0,0,1.01778767145695,1.51150377475524,1.69808842831471,0.464858073811369,0.411167888021826,0.309706370895104,0.28769239232215,0,0,0,0,0,0.752969358170419,0.545812300115692,0.224723484445085,1.22433556948361,0.320929027076094,0,0.989553900560148,0.398927315243264,0.426224750532694,0,0.56738522469114,0,0.251248665256743,0,0.434377689410233,0.605399502633369,0,0,0,0.212604299965044,0,0.112328631146495,0.600707571366025,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,29.2568239576754,2.68280343881454,8.56679164351653,8.31310050484502,10.5280961233537,7.67686550492366,1.5905718941022,2.91980922181582,2.6469748805939,1.77383517970051,2.45937399940753,2.94702919869853,0,0,0.324547393654683,0.174129737299267,0.531831842075461,0,0,0.371457501329565,1.39133685156694,0.860234595106124,1.04142150482278,2.82653970962005,1.67799774483962,0.825354125820202,1.46296476575767,0.775250277507987,0,0,0.402829317109147,0.760272105718513,0,0,3.24056779152704,0.625098097988558,0.44905874525234,1.46394924628319,0,0,0.916008719652036,0,0,0,0,0.759783069987479,0.397227542439656,1.72101972449288,1.06400514659507,2.24271040056923,2.1349799145941,1.2333377420858,4.35695449559673,1.21239604862719,2.45192854670188,0.756787138224657,0.576175924479999,0.234321431833797,0.312160076830321,1.1409436430889,0.298897361103602,0,0,0,0.204154171254893,0,0.413303124703062,0,0.741800787835671,0,0,0.168336113954066,0.125118519871964,0,2.63386572528503,0.919463387397059,2.25357088359895,3.40296549480063,3.04962380671065,1.06778694409284,1.05965950579781,1.20036438433761,0.309157587715317,1.28820270022815,0.930584281657949,2.86919764810153,1.26668106709558,1.7670364197088,1.28869858099219,1.77810662500693,1.77504796258307,1.30977727695932,2.54340888465731,0,0,0,0.487894824518382,0.265059536642971,1.2781333715647,0.725627385107593,0.756962552626885,0,0,0,0,0,0.721879481669586,1.77460200059766,2.19160097101532,1.92808823906786,3.19852520923942,3.7039505495709,1.18635309555548,1.61797569792197,2.15843611637881,0.769494313892781,2.21446636387394,1.40241773803446,1.2347220339942,0,0,0.982827216677626,3.54473944008842,0,0.983907508344908,1.88724591328378,0,0,0,0,0,0,1.44331342025273,2.66639931442677,1.87853910777315,0.577465791044295,0,1.52203321787679,0,2.57545848628462,0.738651018262192,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0.253991577168676,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0,0,0.514414748524284,0,1.0656887160644,1.14382394926518,2.71310802695722,0.823240336780769,0,2.13235169245527,0,0.602878754119172,0,0.899756920638513,0,0,2.10833939483032,1.19812427745791,1.14861935834114,0,1.30303176000821,0.61642896765115,1.07436577943937,0,0,0,0,0,0,0.773288812777695,0,1.27587750330633,0,0,0,2.08575535922538,1.00034104211935,0,1.03985430765404,0.535286966391485,0.946214490203608,0.117141414992713,0.300946099727719,2.27407504055985,2.0694614258501,0.664225598535437,0.184369168541703,1.21637060255316,0.391602314925481,0.343143423810856,0,0,0,0,0,0.30239029332968,0.744323423456331,5.21770709179412,1.68396056659844,1.92208723883551,0,2.41280881715411,2.96836132889982,0,0.887808626565635,0.821271560138091,0,0.581051892299796,0.725156697549733,0,0,0.68888668898764,0.364182336013434,1.44236856455367,0.451199612907412,0.231046011313244,0.784349769176855,1.46139224653261,0.316654886678627,0,0.340187410553031,2.15915916102139,0,1.08378575017541,4.01351819083883,0,0,0.895499018888713,0,0,7.43705362837529,15.0886737021865,2.27764876265012,3.09123034943167,1.19040304263846,2.64030399745882,0,0,0,0.290012154876366,0.154048617114644,0.767518373630648,0,0.214840489736547,0.290033387828457,0.255679882248303,0.445160178233687,0,0,0,0,0,0.94443704049192,2.0911118104818,2.15623506123262,0,0.869932992075073,0.55597265731176,0.715624433709956,1.48863347743867,0,0.190630193923825,0.511795582622668,0.42793898803392,3.18203247925937,0.78494864019923,0.179872457583315,0.54907405947211,0.235624804691373,0.404364963146632,3.17020642346017,0,0.975267478179181,0.243713489631284,0,0.9554993798559,0,2.26016233240486,4.41092274836899,1.99031692572366,0.876901770507525,1.15755106853338,0.655894752046633,0.202910376962704,0.30982349809975,0,0,0.0982490410131212,0.35667105148125,0.354761064070598,8.2331977766089,4.28083360847872,2.27683904259429,1.39973888097993,0,0,0,4.5189024372854,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,3.41837027607914,0,0.245040215981032,0,0.28853842595289,0,0.478278818186467,2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| ||
|short_description=p3@SMAD6 | |||
}} | }} |
Latest revision as of 16:41, 18 September 2015
Short description: | p3@SMAD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SMAD6_5end |
Coexpression cluster: | C3505_Cardiac_Retinal_lung_Chondrocyte_Synoviocyte_tenocyte_seminal |
Association with transcript: | -39bp_to_ENST00000288840_5end |
EntrezGene: | SMAD6 |
HGNC: | 6772 |
UniProt: | O43541 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 5.32e-07 | 9 |
carbohydrate secreting cell | 5.32e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
heart | 5.59e-07 | 24 |
primitive heart tube | 5.59e-07 | 24 |
primary heart field | 5.59e-07 | 24 |
anterior lateral plate mesoderm | 5.59e-07 | 24 |
heart tube | 5.59e-07 | 24 |
heart primordium | 5.59e-07 | 24 |
cardiac mesoderm | 5.59e-07 | 24 |
cardiogenic plate | 5.59e-07 | 24 |
heart rudiment | 5.59e-07 | 24 |
pigment epithelium of eye | 7.57e-07 | 11 |