FFCP PHASE1:Hg19::chr4:77069573..77069592,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53371 | |EntrezGene=53371 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17359 | |HGNC=17359 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000508583_5end | |association_with_transcript=0bp_to_ENST00000508583_5end | ||
|cluster_id=chr4:77069573..77069592,- | |||
|description=CAGE_peak_2_at_NUP54_5end | |description=CAGE_peak_2_at_NUP54_5end | ||
|id=chr4:77069573..77069592,- | |id=chr4:77069573..77069592,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.48e-15!235;DOID:14566!8.30e-14!239;DOID:0050687!4.22e-13!143;DOID:305!3.25e-09!106;DOID:0050686!1.99e-07!137;DOID:3095!6.52e-07!22;DOID:2994!6.52e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;7.98e-07;22!DOID:2994;7.98e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.49e-15,235;DOID:14566,8.23e-14,239;DOID:0050687,4.22e-13,143;DOID:305,3.25e-09,106;DOID:0050686,2.00e-07,137;DOID:3095,6.52e-07,22;DOID:2994,6.52e-07,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;9.92e-08;49 | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@NUP54 | |short_description=p2@NUP54 | ||
}} | }} |
Latest revision as of 17:27, 18 September 2015
Short description: | p2@NUP54 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NUP54_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000508583_5end |
EntrezGene: | NUP54 |
HGNC: | 17359 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cancer | 1.49e-15 | 235 |
disease of cellular proliferation | 8.23e-14 | 239 |
cell type cancer | 4.22e-13 | 143 |
carcinoma | 3.25e-09 | 106 |
organ system cancer | 2.00e-07 | 137 |
germ cell and embryonal cancer | 6.52e-07 | 22 |
germ cell cancer | 6.52e-07 | 22 |