FFCP PHASE1:Hg19::chr4:77507543..77507554,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57619 | |EntrezGene=57619 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30422 | |HGNC=30422 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=77bp_to_ENST00000484236_5end | |association_with_transcript=77bp_to_ENST00000484236_5end | ||
|cluster_id=chr4:77507543..77507554,+ | |||
|description=CAGE_peak_18_at_SHROOM3_5end | |description=CAGE_peak_18_at_SHROOM3_5end | ||
|id=chr4:77507543..77507554,+ | |id=chr4:77507543..77507554,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000313;3.11e-11;1 | |ontology_enrichment_celltype_v019=CL:0000313;3.11e-11;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000313,2.18e-11,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.11e-14;3!UBERON:0001045;3.11e-11;1!UBERON:0008801;3.11e-11;1 | |ontology_enrichment_development_v019=UBERON:0006215;2.11e-14;3!UBERON:0001045;3.11e-11;1!UBERON:0008801;3.11e-11;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:6193;1.24e-11;1!DOID:2152;3.11e-11;1!DOID:299;9.54e-07;25 | |ontology_enrichment_disease_v019=DOID:6193;1.24e-11;1!DOID:2152;3.11e-11;1!DOID:299;9.54e-07;25 | ||
|ontology_enrichment_disease_v019_2=DOID:6193,1.18e-11,1;DOID:2152,2.18e-11,1;DOID:299,9.12e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.24e-15!115;UBERON:0000062!1.90e-08!511;UBERON:0002294!1.65e-07!7;UBERON:0001173!1.65e-07!7;UBERON:0004912!1.65e-07!7;UBERON:0000481!2.80e-07!347 | |ontology_enrichment_uberon=UBERON:0007023!1.24e-15!115;UBERON:0000062!1.90e-08!511;UBERON:0002294!1.65e-07!7;UBERON:0001173!1.65e-07!7;UBERON:0004912!1.65e-07!7;UBERON:0000481!2.80e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;1.05e-20;2!UBERON:0004913;8.61e-12;1!UBERON:0003703;8.61e-12;1!UBERON:0001174;8.61e-12;1!UBERON:0004914;8.61e-12;1!UBERON:0002394;2.61e-11;4!UBERON:0003928;2.61e-11;4!UBERON:0001154;3.11e-11;1!UBERON:0001831;3.11e-11;1!UBERON:0001153;3.11e-11;1!UBERON:0004911;3.11e-11;1!UBERON:0009854;3.11e-11;1!UBERON:0001567;3.11e-11;1!UBERON:0003296;7.71e-11;4!UBERON:0010133;7.71e-11;4!UBERON:0000160;3.98e-09;17!UBERON:0002108;4.58e-09;4!UBERON:0004907;7.54e-09;5!UBERON:0002037;1.21e-07;6!UBERON:0005409;3.56e-07;22!UBERON:0002294;8.01e-07;7!UBERON:0001173;8.01e-07;7!UBERON:0004921;9.87e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0000007;1.05e-20;2!UBERON:0004913;8.61e-12;1!UBERON:0003703;8.61e-12;1!UBERON:0001174;8.61e-12;1!UBERON:0004914;8.61e-12;1!UBERON:0002394;2.61e-11;4!UBERON:0003928;2.61e-11;4!UBERON:0001154;3.11e-11;1!UBERON:0001831;3.11e-11;1!UBERON:0001153;3.11e-11;1!UBERON:0004911;3.11e-11;1!UBERON:0009854;3.11e-11;1!UBERON:0001567;3.11e-11;1!UBERON:0003296;7.71e-11;4!UBERON:0010133;7.71e-11;4!UBERON:0000160;3.98e-09;17!UBERON:0002108;4.58e-09;4!UBERON:0004907;7.54e-09;5!UBERON:0002037;1.21e-07;6!UBERON:0005409;3.56e-07;22!UBERON:0002294;8.01e-07;7!UBERON:0001173;8.01e-07;7!UBERON:0004921;9.87e-07;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,3.84e-21,2;UBERON:0004913,8.62e-12,1;UBERON:0003703,8.62e-12,1;UBERON:0001174,8.62e-12,1;UBERON:0004914,8.62e-12,1;UBERON:0004911,2.18e-11,1;UBERON:0001154,2.42e-11,1;UBERON:0001153,2.42e-11,1;UBERON:0001045,2.42e-11,1;UBERON:0003296,4.68e-11,4;UBERON:0010133,4.68e-11,4;UBERON:0001831,6.00e-11,1;UBERON:0001567,6.00e-11,1;UBERON:0008801,6.00e-11,1;UBERON:0000160,3.32e-09,17;UBERON:0002108,3.53e-09,4;UBERON:0004907,6.98e-09,5;UBERON:0002394,7.57e-08,6;UBERON:0003928,7.57e-08,6;UBERON:0002037,1.25e-07,6;UBERON:0006215,1.25e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616122696835318,1.56869953835371,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,1.09883357782012,1.15513299888823,0,0,0,0,0,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,1.19548792950642,1.65770349318689,0,0,0,0,2.69605053441981,0,0,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0.254253650292766,0,0,0,0,0,0,1.52581736317083,2.10100593869327,0.591095237907095,0.438770794307945,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0.549585560411174,0,0,0,0,0,0,0,0,0,0.210998064528027,0.326465616318295,0.706765357169704,0,0.995261931078505,0.973033209536731,0,0,0,0,0,0,0,0,0,0,0.394584402849391,1.20990716048664,0,0,0.150323419414493,0.207376382794494,0,0,0,0,0,0.138674673013139,0,0,0,0.698906672968121,2.57979048707425,0,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0.195551382734803,0.240476460754601,0.85381197895741,0.19980960958213,0,0.458146384663663,0,0,0,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0.458320848023367,0,0,0,0,0.335917362433631,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.961086713109252,1.10043013569766,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0.192619830407303,0,0,0.453411851024545,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.50566779354999,0.0675375846183947,0,0,0.0634158101939068,0,1.09651553371436,0,0.175871244359621,0.127762427639595,0,0,1.82089681270989,1.82129753081038,0.177404740325278,0,0,0.135939465953663,0,0.118193840883968,0,0.078493092850514,0,1.40136081656895,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.860454717640555,0,0,0,2.52017555398455,0,0,1.67783147696688,0,3.16986604953901,0,0,0,0,0,0,0,0,0,0.150962843566674,1.85217979459067,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0.240724100067505,0,0.917458566809082,0,0,0,0,0,0,0,0,0.126166424835079,0,0.126698501011437,0,0,0,0.250707539292375,0.151557396436479,0,0,0.103432995861895,0.213233981900981,0,0.0645889098360061,0,0.33639558774184,0.190941474834495,0,0,0,0,0.215166616178029,0,0.0814032686109745,0,0,0.359300808426348,0,0,0.406896178315738,0,0,0 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| ||
|short_description=p18@SHROOM3 | |short_description=p18@SHROOM3 | ||
}} | }} |
Latest revision as of 18:05, 18 September 2015
Short description: | p18@SHROOM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_SHROOM3_5end |
Coexpression cluster: | NA |
Association with transcript: | 77bp_to_ENST00000484236_5end |
EntrezGene: | SHROOM3 |
HGNC: | 30422 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 2.18e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 3.84e-21 | 2 |
hepatopancreatic ampulla | 8.62e-12 | 1 |
extrahepatic bile duct | 8.62e-12 | 1 |
common bile duct | 8.62e-12 | 1 |
duodenal papilla | 8.62e-12 | 1 |
epithelium of female gonad | 2.18e-11 | 1 |
vermiform appendix | 2.42e-11 | 1 |
caecum | 2.42e-11 | 1 |
midgut | 2.42e-11 | 1 |
gland of diencephalon | 4.68e-11 | 4 |
neuroendocrine gland | 4.68e-11 | 4 |
parotid gland | 6.00e-11 | 1 |
cheek | 6.00e-11 | 1 |
parotid gland primordium | 6.00e-11 | 1 |
intestine | 3.32e-09 | 17 |
small intestine | 3.53e-09 | 4 |
lower digestive tract | 6.98e-09 | 5 |
bile duct | 7.57e-08 | 6 |
digestive system duct | 7.57e-08 | 6 |
cerebellum | 1.25e-07 | 6 |
rhombic lip | 1.25e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.18e-11 | 1 |
ovary epithelial cancer | 2.18e-11 | 1 |
adenocarcinoma | 9.12e-07 | 25 |