FFCP PHASE1:Hg19::chr15:68724490..68724516,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22801 | |EntrezGene=22801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6136 | |HGNC=6136 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UKX5,F5H1A1,B3KTN6 | |UniProt=Q9UKX5,F5H1A1,B3KTN6 | ||
|association_with_transcript=0bp_to_ENST00000315757,ENST00000423218,ENST00000537153,NM_001004439,uc002ari.2,uc010bib.2_5end | |association_with_transcript=0bp_to_ENST00000315757,ENST00000423218,ENST00000537153,NM_001004439,uc002ari.2,uc010bib.2_5end | ||
|cluster_id=chr15:68724490..68724516,- | |||
|coexpression_cluster_id=C836 | |||
|description=CAGE_peak_1_at_ITGA11_5end | |description=CAGE_peak_1_at_ITGA11_5end | ||
|id=chr15:68724490..68724516,- | |id=chr15:68724490..68724516,- | ||
|ontology_enrichment_celltype=CL:0000055!1.66e-37!180;CL:0000057!7.24e-22!75;CL:0000183!2.74e-12!59;CL:0000680!1.24e-11!57;CL:0000056!1.24e-11!57;CL:0000355!1.24e-11!57;CL:0000187!8.66e-11!54;CL:0000222!2.77e-10!119;CL:0000192!5.43e-10!42;CL:0000514!5.43e-10!42;CL:0000393!1.88e-09!60;CL:0000211!1.88e-09!60;CL:0002620!9.91e-09!23;CL:0000359!1.47e-08!32;CL:0002334!3.73e-07!12 | |ontology_enrichment_celltype=CL:0000055!1.66e-37!180;CL:0000057!7.24e-22!75;CL:0000183!2.74e-12!59;CL:0000680!1.24e-11!57;CL:0000056!1.24e-11!57;CL:0000355!1.24e-11!57;CL:0000187!8.66e-11!54;CL:0000222!2.77e-10!119;CL:0000192!5.43e-10!42;CL:0000514!5.43e-10!42;CL:0000393!1.88e-09!60;CL:0000211!1.88e-09!60;CL:0002620!9.91e-09!23;CL:0000359!1.47e-08!32;CL:0002334!3.73e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000057;1.51e-09;73!CL:0000359;5.72e-09;32!CL:0002620;1.36e-08;23!CL:0002320;5.64e-08;188!CL:0002334;1.05e-07;12!CL:0000192;1.77e-07;43!CL:0000134;3.11e-07;55!CL:0000048;7.61e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.00e-23,76;CL:0000680,2.73e-11,58;CL:0000056,2.73e-11,58;CL:0000355,2.73e-11,58;CL:0000187,2.15e-10,55;CL:0000192,4.11e-10,43;CL:0000514,4.11e-10,43;CL:0000359,2.31e-09,32;CL:0000393,2.35e-09,61;CL:0000211,2.35e-09,61;CL:0000222,2.39e-09,121;CL:0002620,1.63e-08,23;CL:0000048,2.34e-08,427;CL:0002334,1.05e-07,12;CL:0000723,1.66e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000514;1.77e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!1.45e-12!70;UBERON:0000914!3.93e-12!83;UBERON:0002329!3.93e-12!83;UBERON:0003077!3.93e-12!83;UBERON:0003059!3.93e-12!83;UBERON:0007282!3.93e-12!83;UBERON:0009618!3.93e-12!83;UBERON:0007285!3.93e-12!83;UBERON:0002385!1.06e-11!63;UBERON:0001015!1.06e-11!63;UBERON:0000383!1.06e-11!63;UBERON:0004872!1.15e-11!84;UBERON:0001134!1.79e-11!61;UBERON:0002036!1.79e-11!61;UBERON:0003082!1.79e-11!61;UBERON:0002049!1.86e-11!79;UBERON:0007798!1.86e-11!79;UBERON:0000475!2.65e-10!365;UBERON:0005256!3.51e-10!143;UBERON:0000486!2.99e-09!82;UBERON:0000055!3.20e-09!69;UBERON:0003914!7.61e-09!118;UBERON:0001009!7.74e-09!113;UBERON:0001981!9.56e-09!60;UBERON:0007500!9.56e-09!60;UBERON:0004537!9.56e-09!60;UBERON:0006965!9.56e-09!60;UBERON:0004535!1.52e-08!110;UBERON:0001637!2.36e-07!42;UBERON:0003509!2.36e-07!42;UBERON:0004572!2.36e-07!42;UBERON:0000119!2.61e-07!312;UBERON:0004573!4.33e-07!33;UBERON:0004571!4.33e-07!33;UBERON:0007100!5.09e-07!27;UBERON:0000468!5.63e-07!659;UBERON:0000477!6.89e-07!286;UBERON:0000948!7.72e-07!24;UBERON:0005498!7.72e-07!24;UBERON:0004140!7.72e-07!24;UBERON:0009881!7.72e-07!24;UBERON:0004141!7.72e-07!24;UBERON:0003084!7.72e-07!24;UBERON:0007005!7.72e-07!24;UBERON:0004139!7.72e-07!24;UBERON:0004291!7.72e-07!24;UBERON:0000483!9.32e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;3.67e-08;198 | |||
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| ||
|short_description=p1@ITGA11 | |short_description=p1@ITGA11 | ||
}} | }} |
Latest revision as of 18:42, 18 September 2015
Short description: | p1@ITGA11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ITGA11_5end |
Coexpression cluster: | C836_Preadipocyte_osteoclastoma_Ewing_Fibroblast_Adipocyte_Osteoblast_hepatic |
Association with transcript: | 0bp_to_ENST00000315757, ENST00000423218, ENST00000537153, NM_001004439, uc002ari.2, uc010bib.2_5end |
EntrezGene: | ITGA11 |
HGNC: | 6136 |
UniProt: | Q9UKX5F5H1A1B3KTN6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.00e-23 | 76 |
muscle precursor cell | 2.73e-11 | 58 |
myoblast | 2.73e-11 | 58 |
multi-potent skeletal muscle stem cell | 2.73e-11 | 58 |
muscle cell | 2.15e-10 | 55 |
smooth muscle cell | 4.11e-10 | 43 |
smooth muscle myoblast | 4.11e-10 | 43 |
vascular associated smooth muscle cell | 2.31e-09 | 32 |
electrically responsive cell | 2.35e-09 | 61 |
electrically active cell | 2.35e-09 | 61 |
mesodermal cell | 2.39e-09 | 121 |
skin fibroblast | 1.63e-08 | 23 |
multi fate stem cell | 2.34e-08 | 427 |
preadipocyte | 1.05e-07 | 12 |
somatic stem cell | 1.66e-07 | 433 |