FFCP PHASE1:Hg19::chr1:175036966..175036974,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=63923 | |EntrezGene=63923 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22942 | |HGNC=22942 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UQP3,B3KXB6 | |UniProt=Q9UQP3,B3KXB6 | ||
|association_with_transcript=-19bp_to_ENST00000239462,NM_022093,uc001gkl.1_5end | |association_with_transcript=-19bp_to_ENST00000239462,NM_022093,uc001gkl.1_5end | ||
|cluster_id=chr1:175036966..175036974,+ | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_1_at_TNN_5end | |description=CAGE_peak_1_at_TNN_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!1.33e-08!5 | |ontology_enrichment_celltype=CL:0002322!1.33e-08!5 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;5.85e-14;1!UBERON:0006298;1.10e-13;1!UBERON:0008814;1.75e-07;2!UBERON:0010056;1.75e-07;2 | |ontology_enrichment_development_v019=UBERON:0006242;5.85e-14;1!UBERON:0006298;1.10e-13;1!UBERON:0008814;1.75e-07;2!UBERON:0010056;1.75e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p1@TNN | |short_description=p1@TNN | ||
}} | }} |
Latest revision as of 19:38, 18 September 2015
Short description: | p1@TNN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNN_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -19bp_to_ENST00000239462, NM_022093, uc001gkl.1_5end |
EntrezGene: | TNN |
HGNC: | 22942 |
UniProt: | Q9UQP3B3KXB6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.29e-26 | 2 |
regional part of epithalamus | 1.29e-26 | 2 |
secretory circumventricular organ | 1.29e-26 | 2 |
circumventricular organ | 1.29e-26 | 2 |
epithalamus | 1.29e-26 | 2 |
tongue | 1.18e-17 | 3 |
gustatory system | 1.18e-17 | 3 |
future tongue | 1.18e-17 | 3 |
gland of diencephalon | 8.06e-14 | 4 |
neuroendocrine gland | 8.06e-14 | 4 |
regional part of diencephalon | 8.06e-14 | 4 |
submandibular gland | 1.10e-13 | 1 |
submandibular gland primordium | 1.10e-13 | 1 |
surface | 1.61e-13 | 1 |
sense organ | 1.47e-08 | 24 |
sensory system | 1.47e-08 | 24 |
entire sense organ system | 1.47e-08 | 24 |
diencephalon | 2.78e-08 | 7 |
future diencephalon | 2.78e-08 | 7 |
throat | 1.36e-07 | 2 |
open tracheal system trachea | 1.54e-07 | 2 |
major salivary gland | 1.75e-07 | 2 |
pharyngeal arch system | 8.00e-07 | 18 |