FFCP PHASE1:Hg19::chr6:42141039..42141080,+: Difference between revisions
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|id=chr6:42141039..42141080,+
|short_description=p3@GUCA1A
|description=CAGE_peak_3_at_GUCA1A_5end
|association_with_transcript=10bp_to_ENST00000372958_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2978 | |EntrezGene=2978 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4678 | |HGNC=4678 | ||
|TSSclassifier=strong | |||
|UniProt=P43080 | |UniProt=P43080 | ||
|association_with_transcript=10bp_to_ENST00000372958_5end | |||
|cluster_id=chr6:42141039..42141080,+ | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_3_at_GUCA1A_5end | |||
|id=chr6:42141039..42141080,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.60e-14;3 | |||
|ontology_enrichment_disease=DOID:3093!1.37e-07!11 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!8.98e-41!2;UBERON:0002757!8.98e-41!2;UBERON:0010134!8.98e-41!2;UBERON:0002784!8.98e-41!2;UBERON:0005408!8.98e-41!2;UBERON:0001899!8.98e-41!2;UBERON:0003296!5.72e-21!4;UBERON:0010133!5.72e-21!4;UBERON:0000966!6.40e-17!5;UBERON:0005388!6.40e-17!5;UBERON:0001802!6.40e-17!5;UBERON:0000970!2.68e-16!20;UBERON:0002104!1.53e-15!21;UBERON:0000020!3.15e-14!23;UBERON:0001032!1.19e-13!24;UBERON:0004456!1.19e-13!24;UBERON:0001894!2.00e-12!7;UBERON:0006222!2.00e-12!7;UBERON:0002360!3.35e-11!2;UBERON:0000094!3.35e-11!2;UBERON:0007645!3.35e-11!2;UBERON:0002148!3.70e-11!2;UBERON:0009662!3.70e-11!2;UBERON:0003075!6.13e-11!86;UBERON:0007284!6.13e-11!86;UBERON:0005743!7.59e-11!86;UBERON:0002346!1.90e-10!90;UBERON:0000019!4.87e-10!19;UBERON:0000047!4.87e-10!19;UBERON:0004088!4.87e-10!19;UBERON:0003072!4.87e-10!19;UBERON:0003071!4.87e-10!19;UBERON:0004128!4.87e-10!19;UBERON:0000073!8.17e-10!94;UBERON:0001016!8.17e-10!94;UBERON:0001456!3.85e-09!21;UBERON:0001017!1.96e-08!82;UBERON:0003056!3.84e-08!61;UBERON:0000988!7.26e-08!3;UBERON:0006331!7.26e-08!3;UBERON:0000033!1.55e-07!123;UBERON:0000153!3.57e-07!129;UBERON:0007811!3.57e-07!129;UBERON:0000955!4.09e-07!69;UBERON:0006238!4.09e-07!69;UBERON:0004121!5.33e-07!169;UBERON:0000924!7.89e-07!173;UBERON:0006601!7.89e-07!173;UBERON:0005085!8.95e-07!29 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.22e-79;2!UBERON:0002757;5.22e-79;2!UBERON:0010134;5.22e-79;2!UBERON:0005408;5.22e-79;2!UBERON:0001899;5.22e-79;2!UBERON:0003296;3.31e-40;4!UBERON:0010133;3.31e-40;4!UBERON:0002784;3.31e-40;4!UBERON:0001894;1.61e-23;7!UBERON:0000966;2.97e-09;5!UBERON:0005388;2.97e-09;5!UBERON:0001802;2.97e-09;5!UBERON:0000970;5.48e-09;20!UBERON:0002104;1.32e-08;21!UBERON:0000020;6.08e-08;23!UBERON:0001032;1.19e-07;24!UBERON:0004456;1.19e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.22e-79,2;UBERON:0002757,5.22e-79,2;UBERON:0010134,5.22e-79,2;UBERON:0005408,5.22e-79,2;UBERON:0001899,5.22e-79,2;UBERON:0003296,3.31e-40,4;UBERON:0010133,3.31e-40,4;UBERON:0002784,3.31e-40,4;UBERON:0001894,1.61e-23,7;UBERON:0006222,1.61e-23,7;UBERON:0000970,1.32e-08,21;UBERON:0002104,1.32e-08,21;UBERON:0000966,6.34e-08,6;UBERON:0005388,6.34e-08,6;UBERON:0001802,6.34e-08,6;UBERON:0000020,1.19e-07,24;UBERON:0001032,1.19e-07,24;UBERON:0004456,1.19e-07,24 | |||
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|short_description=p3@GUCA1A | |||
}} | }} |
Latest revision as of 19:45, 18 September 2015
Short description: | p3@GUCA1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GUCA1A_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 10bp_to_ENST00000372958_5end |
EntrezGene: | GUCA1A |
HGNC: | 4678 |
UniProt: | P43080 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 5.22e-79 | 2 |
regional part of epithalamus | 5.22e-79 | 2 |
secretory circumventricular organ | 5.22e-79 | 2 |
circumventricular organ | 5.22e-79 | 2 |
epithalamus | 5.22e-79 | 2 |
gland of diencephalon | 3.31e-40 | 4 |
neuroendocrine gland | 3.31e-40 | 4 |
regional part of diencephalon | 3.31e-40 | 4 |
diencephalon | 1.61e-23 | 7 |
future diencephalon | 1.61e-23 | 7 |
eye | 1.32e-08 | 21 |
visual system | 1.32e-08 | 21 |
retina | 6.34e-08 | 6 |
photoreceptor array | 6.34e-08 | 6 |
posterior segment of eyeball | 6.34e-08 | 6 |
sense organ | 1.19e-07 | 24 |
sensory system | 1.19e-07 | 24 |
entire sense organ system | 1.19e-07 | 24 |