FFCP PHASE1:Hg19::chr1:1763752..1763766,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2782 | |EntrezGene=2782 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4396 | |HGNC=4396 | ||
|TSSclassifier=strong | |||
|UniProt=B1AKQ8 | |UniProt=B1AKQ8 | ||
|association_with_transcript=-28bp_to_ENST00000437146_5end | |association_with_transcript=-28bp_to_ENST00000437146_5end | ||
|cluster_id=chr1:1763752..1763766,- | |||
|coexpression_cluster_id=C40 | |coexpression_cluster_id=C40 | ||
|description=CAGE_peak_11_at_GNB1_5end | |description=CAGE_peak_11_at_GNB1_5end | ||
|id=chr1:1763752..1763766,- | |id=chr1:1763752..1763766,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;8.00e-18;3 | |||
|ontology_enrichment_disease=DOID:3493!6.94e-09!2 | |ontology_enrichment_disease=DOID:3493!6.94e-09!2 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000966!2.68e-13!5;UBERON:0005388!2.68e-13!5;UBERON:0001802!2.68e-13!5;UBERON:0000970!1.28e-12!20;UBERON:0002104!4.93e-12!21;UBERON:0000020!5.17e-11!23;UBERON:0001032!1.45e-10!24;UBERON:0004456!1.45e-10!24;UBERON:0001905!4.34e-09!2;UBERON:0002757!4.34e-09!2;UBERON:0010134!4.34e-09!2;UBERON:0002784!4.34e-09!2;UBERON:0005408!4.34e-09!2;UBERON:0001899!4.34e-09!2;UBERON:0003127!8.09e-09!2;UBERON:0000019!7.63e-08!19;UBERON:0000047!7.63e-08!19;UBERON:0004088!7.63e-08!19;UBERON:0003072!7.63e-08!19;UBERON:0003071!7.63e-08!19;UBERON:0004128!7.63e-08!19;UBERON:0001456!3.80e-07!21 | |ontology_enrichment_uberon=UBERON:0000966!2.68e-13!5;UBERON:0005388!2.68e-13!5;UBERON:0001802!2.68e-13!5;UBERON:0000970!1.28e-12!20;UBERON:0002104!4.93e-12!21;UBERON:0000020!5.17e-11!23;UBERON:0001032!1.45e-10!24;UBERON:0004456!1.45e-10!24;UBERON:0001905!4.34e-09!2;UBERON:0002757!4.34e-09!2;UBERON:0010134!4.34e-09!2;UBERON:0002784!4.34e-09!2;UBERON:0005408!4.34e-09!2;UBERON:0001899!4.34e-09!2;UBERON:0003127!8.09e-09!2;UBERON:0000019!7.63e-08!19;UBERON:0000047!7.63e-08!19;UBERON:0004088!7.63e-08!19;UBERON:0003072!7.63e-08!19;UBERON:0003071!7.63e-08!19;UBERON:0004128!7.63e-08!19;UBERON:0001456!3.80e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;9.18e-26;2!UBERON:0002757;9.18e-26;2!UBERON:0010134;9.18e-26;2!UBERON:0005408;9.18e-26;2!UBERON:0001899;9.18e-26;2!UBERON:0003296;1.29e-13;4!UBERON:0010133;1.29e-13;4!UBERON:0002784;1.29e-13;4!UBERON:0000966;2.94e-11;5!UBERON:0005388;2.94e-11;5!UBERON:0001802;2.94e-11;5!UBERON:0000970;5.16e-11;20!UBERON:0002104;1.53e-10;21!UBERON:0000020;1.02e-09;23!UBERON:0001032;2.35e-09;24!UBERON:0004456;2.35e-09;24!UBERON:0001894;2.35e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,9.18e-26,2;UBERON:0002757,9.18e-26,2;UBERON:0010134,9.18e-26,2;UBERON:0005408,9.18e-26,2;UBERON:0001899,9.18e-26,2;UBERON:0003296,1.29e-13,4;UBERON:0010133,1.29e-13,4;UBERON:0002784,1.29e-13,4;UBERON:0000970,1.53e-10,21;UBERON:0002104,1.53e-10,21;UBERON:0000966,1.32e-09,6;UBERON:0005388,1.32e-09,6;UBERON:0001802,1.32e-09,6;UBERON:0000020,2.35e-09,24;UBERON:0001032,2.35e-09,24;UBERON:0004456,2.35e-09,24;UBERON:0001894,2.35e-08,7;UBERON:0006222,2.35e-08,7 | |||
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|short_description=p11@GNB1 | |short_description=p11@GNB1 | ||
}} | }} |
Latest revision as of 20:15, 18 September 2015
Short description: | p11@GNB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_GNB1_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | -28bp_to_ENST00000437146_5end |
EntrezGene: | GNB1 |
HGNC: | 4396 |
UniProt: | B1AKQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 9.18e-26 | 2 |
regional part of epithalamus | 9.18e-26 | 2 |
secretory circumventricular organ | 9.18e-26 | 2 |
circumventricular organ | 9.18e-26 | 2 |
epithalamus | 9.18e-26 | 2 |
gland of diencephalon | 1.29e-13 | 4 |
neuroendocrine gland | 1.29e-13 | 4 |
regional part of diencephalon | 1.29e-13 | 4 |
eye | 1.53e-10 | 21 |
visual system | 1.53e-10 | 21 |
retina | 1.32e-09 | 6 |
photoreceptor array | 1.32e-09 | 6 |
posterior segment of eyeball | 1.32e-09 | 6 |
sense organ | 2.35e-09 | 24 |
sensory system | 2.35e-09 | 24 |
entire sense organ system | 2.35e-09 | 24 |
diencephalon | 2.35e-08 | 7 |
future diencephalon | 2.35e-08 | 7 |