FFCP PHASE1:Hg19::chr2:182756701..182756720,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6744 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11319 | |||
|TSSclassifier=strong | |||
|UniProt=E9PHV5 | |||
|association_with_transcript=0bp_to_ENST00000409001_5end | |||
|cluster_id=chr2:182756701..182756720,+ | |||
|coexpression_cluster_id=C2674 | |||
|description=CAGE_peak_7_at_SSFA2_5end | |||
|id=chr2:182756701..182756720,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.92e-09!24;CL:0000071!6.26e-09!18;CL:0002546!6.26e-09!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.04e-10;24!CL:0000071;4.18e-10;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.94e-11,24;CL:0000071,1.31e-10,18;CL:0002546,1.31e-10,18;CL:0000115,1.72e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002546;4.18e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!8.41e-15!625;UBERON:0000480!9.69e-15!626;UBERON:0000468!2.51e-12!659;UBERON:0002050!3.91e-11!605;UBERON:0005423!3.91e-11!605;UBERON:0000923!6.27e-11!604;UBERON:0005291!6.27e-11!604;UBERON:0006598!6.27e-11!604;UBERON:0002532!6.27e-11!604;UBERON:0000922!1.01e-10!612;UBERON:0000062!1.55e-10!511;UBERON:0000477!4.42e-10!286;UBERON:0001986!6.26e-09!18;UBERON:0004638!6.26e-09!18;UBERON:0004852!6.26e-09!18;UBERON:0004111!9.40e-08!241;UBERON:0002049!3.23e-07!79;UBERON:0007798!3.23e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.18e-10;18!UBERON:0001986;4.18e-10;18!UBERON:0004852;4.18e-10;18!UBERON:0005631;1.34e-09;10!UBERON:0000158;1.34e-09;10!UBERON:0000487;4.07e-07;22!UBERON:0000305;4.58e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.31e-10,18;UBERON:0001986,1.31e-10,18;UBERON:0004852,1.31e-10,18;UBERON:0002049,6.56e-08,78;UBERON:0007798,6.56e-08,78;UBERON:0000487,1.71e-07,22;UBERON:0000305,3.42e-07,7;UBERON:0005631,3.46e-07,14;UBERON:0000158,3.46e-07,14;UBERON:0000055,7.72e-07,68;UBERON:0007500,8.34e-07,59;UBERON:0001981,8.34e-07,59;UBERON:0004537,8.34e-07,59;UBERON:0006965,8.34e-07,59 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0,0,2.53299878168311,1.26343974685366,0,0,0.697801167972428,3.9319446983431,3.9565046734268,0.618831764800233,0.994192127183747,3.36162573225888,2.41077811209591,3.65155045193687,2.43966399395253,0.861847406537515,1.02000345622126,0.313454721478088,2.0036519099174,3.42186062682211,2.38531015230125,0.0764134057479513,0.164201178899891,0.0787107813136792,0,1.15148819429164,1.70297735647684,0,0.90361775633475,0,0,0,0.587200878669695,3.32397245119126,1.60435557976113,0.434021741431704,0.223915474239924,0,0.515151135268373,0.436194716338694,0.755751887377619,3.15359279544161,0.464858073811369,0.822335776043652,0.619412741790207,0.28769239232215,0.768482119587302,2.36482229888585,1.03423704220986,0.645484683583826,0,0.376484679085209,2.45615535052061,1.34834090667051,1.53041946185451,1.92557416245656,0.639337125799041,0.329851300186716,1.19678194572979,1.27867425159808,2.03146467040009,2.8369261234557,0.622822248995575,0.75374599577023,1.5644487552606,1.3031330682307,0,0.368277635987565,2.21523671208619,0.211255286311942,0.850417199860174,0.419317291016752,0.112328631146495,0.600707571366025,0.64290234678832,0.285012743741249,0.59675003159727,0.365328307529268,0,0,0,0,0,0,0,0,0,0.587237189370939,0,6.60856642895129,2.24203425192614,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.639312809217652,1.80719576192283,1.00267582127178,2.462390822334,0,0.486634870302636,7.46825055596136,5.09977614163897,10.6280090688683,0.982343066232845,1.09288586487763,0,0.649094787309367,0.348259474598534,0.664789802594326,0,0,0,3.9752481473341,5.16140757063675,3.47140501607594,3.39184765154406,1.67799774483962,3.57653454522088,1.67195973229448,5.68516870172524,8.18262404179434,4.68608857870538,2.81980521976403,0.760272105718513,3.41686880567437,4.41195696415042,1.62028389576352,2.41109266367015,3.59246996201872,5.40535106319947,6.13266549863533,8.54339093611316,10.6257011479636,2.63560834872127,0,0,0.993943903390637,1.64619665163954,2.1185468930115,1.72101972449288,0.709336764396714,1.12135520028461,0,0.74000264525148,1.8672662123986,2.55950276932407,3.92308567472301,1.36221684880438,2.30470369792,0.234321431833797,0.624320153660641,0.570471821544449,0.448346041655403,0.23486899728753,0.971237666208789,0.140450806702248,1.42907919878425,5.65037859634133,0.516628905878827,9.50402285825643,2.96720315134268,0,0,2.86171393721913,4.25402967564678,3.87889761677856,2.63386572528503,0,3.00476117813194,0.794025282120147,2.69084453533293,0.640672166455702,0,0.300091096084402,0.92747276314595,2.06112432036503,0.558350568994769,0.168776332241266,0.292311015483596,1.26216887122057,0.276149695926898,0.646584227275248,3.19508633264953,1.20902517873168,0.67824236924195,3.47869535693934,1.63647672354501,3.15485054927904,0,0,0.116193942869518,0.621966330092223,0.252320850875628,0,0,1.28648187638577,0,0.464367928031979,0.721879481669586,2.48444280083672,2.52877035117153,2.6511213287183,2.64705534557745,3.26819166138609,2.84724742933316,2.15730093056263,2.35465758150415,2.30848294167834,2.95262181849859,1.40241773803446,0,0,1.26755034821831,0,1.18157981336281,0,1.10689594688802,3.08822058537346,1.42675371031213,0,0.703702806881416,0.370353780634118,0,0,1.44331342025273,3.13012093432707,7.16193034838512,0.288732895522148,0.462985512576611,1.14152491340759,1.58040879591855,6.00940313466411,0,0,0.148631162288728,1.87467667973554,3.02367830757947,4.53680311175637,0.53735113621709,0.290633938513962,1.15014803749563,15.7652236126702,0.616339038092582,1.86595303986695,3.31475892859011,2.65109110195398,0.507983154337352,0,0,0,0.411309970813294,0.300343057843917,1.42913216315289,1.34557301214433,0.87192013766656,2.3468251462704,1.42198887333556,0,0.845302752556,4.78688609852767,8.32059495290929,0,1.41849132023278,0.266422179016099,0.57191197463259,0,0,0.977208552881205,1.42156779497018,0,0,0.871533458600294,0.199945982364114,0,0,0,0.239624855491583,1.14861935834114,2.85273810081437,0.723906533337896,0.821905290201534,1.07436577943937,0.224170287987055,0.197030760201927,0,0.128343036279748,6.35236560556159,1.30139853857622,3.09315525111078,0.670065061337395,0.637938751653163,0.749007023947182,2.99161459204025,2.07207756718018,0.36807447515742,0.500170521059677,1.08506009479894,0.207970861530807,0.535286966391485,0,0.585707074963566,0.601892199455438,0,0,0,0.921845842708516,0.955719759148911,0.979005787313703,2.74514739048685,0,0.215714200818617,0.106727557803444,0.606255142892519,0,0.604780586659361,0.496215615637554,0.460385919864187,0.280660094433074,0.640695746278505,1.02341449813341,0.64341568457443,0,1.23367755042124,0,1.06765302817952,1.03850885836724,1.04589340613963,1.69203229428271,2.80709058424599,0.828728900423067,1.14814448164607,3.45973219212762,2.88473712910733,2.70719767744447,0.616122696835318,0.784349769176855,1.46139224653261,2.21658420675039,0,1.36074964221213,2.15915916102139,0,3.25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| |||
|short_description=p7@SSFA2 | |||
}} |
Latest revision as of 21:37, 18 September 2015
Short description: | p7@SSFA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SSFA2_5end |
Coexpression cluster: | C2674_tubular_rectal_hepatoblastoma_anaplastic_glioblastoma_chorionic_tridermal |
Association with transcript: | 0bp_to_ENST00000409001_5end |
EntrezGene: | SSFA2 |
HGNC: | 11319 |
UniProt: | E9PHV5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.94e-11 | 24 |
blood vessel endothelial cell | 1.31e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.31e-10 | 18 |
endothelial cell | 1.72e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.31e-10 | 18 |
endothelium | 1.31e-10 | 18 |
cardiovascular system endothelium | 1.31e-10 | 18 |
vasculature | 6.56e-08 | 78 |
vascular system | 6.56e-08 | 78 |
simple squamous epithelium | 1.71e-07 | 22 |
amnion | 3.42e-07 | 7 |
extraembryonic membrane | 3.46e-07 | 14 |
membranous layer | 3.46e-07 | 14 |
vessel | 7.72e-07 | 68 |
epithelial tube open at both ends | 8.34e-07 | 59 |
blood vessel | 8.34e-07 | 59 |
blood vasculature | 8.34e-07 | 59 |
vascular cord | 8.34e-07 | 59 |