FFCP PHASE1:Hg19::chr6:43139248..43139261,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6722 | |EntrezGene=6722 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11291 | |HGNC=11291 | ||
|TSSclassifier=strong | |||
|UniProt=P11831 | |UniProt=P11831 | ||
|association_with_transcript=211bp_to_ENST00000265354_5end | |association_with_transcript=211bp_to_ENST00000265354_5end | ||
|cluster_id=chr6:43139248..43139261,+ | |||
|description=CAGE_peak_4_at_SRF_5end | |description=CAGE_peak_4_at_SRF_5end | ||
|id=chr6:43139248..43139261,+ | |id=chr6:43139248..43139261,+ | ||
|ontology_enrichment_celltype=CL:0000012!4.42e-07!682;CL:0000548!6.02e-07!679;CL:0000004!6.02e-07!679;CL:0000255!6.02e-07!679;CL:0000144!8.31e-07!625 | |ontology_enrichment_celltype=CL:0000012!4.42e-07!682;CL:0000548!6.02e-07!679;CL:0000004!6.02e-07!679;CL:0000255!6.02e-07!679;CL:0000144!8.31e-07!625 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!7.36e-09!69;UBERON:0001981!3.27e-08!60;UBERON:0007500!3.27e-08!60;UBERON:0004537!3.27e-08!60;UBERON:0006965!3.27e-08!60;UBERON:0002049!7.08e-08!79;UBERON:0007798!7.08e-08!79;UBERON:0001637!5.28e-07!42;UBERON:0003509!5.28e-07!42;UBERON:0004572!5.28e-07!42 | |ontology_enrichment_uberon=UBERON:0000055!7.36e-09!69;UBERON:0001981!3.27e-08!60;UBERON:0007500!3.27e-08!60;UBERON:0004537!3.27e-08!60;UBERON:0006965!3.27e-08!60;UBERON:0002049!7.08e-08!79;UBERON:0007798!7.08e-08!79;UBERON:0001637!5.28e-07!42;UBERON:0003509!5.28e-07!42;UBERON:0004572!5.28e-07!42 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007500,7.97e-09,59;UBERON:0001981,7.97e-09,59;UBERON:0004537,7.97e-09,59;UBERON:0006965,7.97e-09,59;UBERON:0000055,1.62e-08,68;UBERON:0004872,1.77e-07,83;UBERON:0001637,2.80e-07,42;UBERON:0003509,2.80e-07,42;UBERON:0004572,2.80e-07,42;UBERON:0003914,4.94e-07,117;UBERON:0002049,5.49e-07,78;UBERON:0007798,5.49e-07,78 | |||
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| ||
|short_description=p4@SRF | |short_description=p4@SRF | ||
}} | }} |
Latest revision as of 21:39, 18 September 2015
Short description: | p4@SRF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SRF_5end |
Coexpression cluster: | NA |
Association with transcript: | 211bp_to_ENST00000265354_5end |
EntrezGene: | SRF |
HGNC: | 11291 |
UniProt: | P11831 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube open at both ends | 7.97e-09 | 59 |
blood vessel | 7.97e-09 | 59 |
blood vasculature | 7.97e-09 | 59 |
vascular cord | 7.97e-09 | 59 |
vessel | 1.62e-08 | 68 |
splanchnic layer of lateral plate mesoderm | 1.77e-07 | 83 |
artery | 2.80e-07 | 42 |
arterial blood vessel | 2.80e-07 | 42 |
arterial system | 2.80e-07 | 42 |
epithelial tube | 4.94e-07 | 117 |
vasculature | 5.49e-07 | 78 |
vascular system | 5.49e-07 | 78 |