FFCP PHASE1:Hg19::chr4:80748640..80748660,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=118425 | |EntrezGene=118425 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=15bp_to_ENST00000504263,NR_026555,uc003hlw.3_5end | |association_with_transcript=15bp_to_ENST00000504263,NR_026555,uc003hlw.3_5end | ||
|cluster_id=chr4:80748640..80748660,+ | |||
|coexpression_cluster_id=C87 | |||
|description=CAGE_peak_1_at_GDEP_5end | |description=CAGE_peak_1_at_GDEP_5end | ||
|id=chr4:80748640..80748660,+ | |id=chr4:80748640..80748660,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;6.76e-18;3!UBERON:0009847;1.12e-17;3!UBERON:0003353;1.12e-17;3 | |||
|ontology_enrichment_disease=DOID:8552!1.65e-16!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!4.59e-32!2;UBERON:0002757!4.59e-32!2;UBERON:0010134!4.59e-32!2;UBERON:0002784!4.59e-32!2;UBERON:0005408!4.59e-32!2;UBERON:0001899!4.59e-32!2;UBERON:0000989!8.86e-17!1;UBERON:0008811!8.86e-17!1;UBERON:0006258!8.86e-17!1;UBERON:0005876!8.86e-17!1;UBERON:0004874!8.86e-17!1;UBERON:0003296!1.42e-16!4;UBERON:0010133!1.42e-16!4;UBERON:0002022!3.07e-16!1;UBERON:0000966!2.09e-13!5;UBERON:0005388!2.09e-13!5;UBERON:0001802!2.09e-13!5;UBERON:0001894!7.00e-10!7;UBERON:0006222!7.00e-10!7;UBERON:0002360!5.94e-09!2;UBERON:0000094!5.94e-09!2;UBERON:0007645!5.94e-09!2;UBERON:0005743!4.32e-08!86;UBERON:0000970!1.48e-07!20;UBERON:0000073!2.72e-07!94;UBERON:0001016!2.72e-07!94;UBERON:0002104!3.21e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.55e-98;2!UBERON:0002757;1.55e-98;2!UBERON:0010134;1.55e-98;2!UBERON:0005408;1.55e-98;2!UBERON:0001899;1.55e-98;2!UBERON:0003296;5.14e-50;4!UBERON:0010133;5.14e-50;4!UBERON:0002784;5.14e-50;4!UBERON:0001894;3.65e-29;7!UBERON:0000966;2.66e-11;5!UBERON:0005388;2.66e-11;5!UBERON:0001802;2.66e-11;5!UBERON:0002530;5.36e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.55e-98,2;UBERON:0002757,1.55e-98,2;UBERON:0010134,1.55e-98,2;UBERON:0005408,1.55e-98,2;UBERON:0001899,1.55e-98,2;UBERON:0003296,5.14e-50,4;UBERON:0010133,5.14e-50,4;UBERON:0002784,5.14e-50,4;UBERON:0001894,3.65e-29,7;UBERON:0006222,3.65e-29,7;UBERON:0000966,1.22e-09,6;UBERON:0005388,1.22e-09,6;UBERON:0001802,1.22e-09,6;UBERON:0002530,1.98e-08,59;UBERON:0003056,4.28e-08,61;UBERON:0000955,2.91e-07,68;UBERON:0006238,2.91e-07,68 | |||
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|short_description=p1@GDEP | |short_description=p1@GDEP | ||
}} | }} |
Latest revision as of 21:39, 18 September 2015
Short description: | p1@GDEP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GDEP_5end |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | 15bp_to_ENST00000504263, NR_026555, uc003hlw.3_5end |
EntrezGene: | GDEP |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.55e-98 | 2 |
regional part of epithalamus | 1.55e-98 | 2 |
secretory circumventricular organ | 1.55e-98 | 2 |
circumventricular organ | 1.55e-98 | 2 |
epithalamus | 1.55e-98 | 2 |
gland of diencephalon | 5.14e-50 | 4 |
neuroendocrine gland | 5.14e-50 | 4 |
regional part of diencephalon | 5.14e-50 | 4 |
diencephalon | 3.65e-29 | 7 |
future diencephalon | 3.65e-29 | 7 |
retina | 1.22e-09 | 6 |
photoreceptor array | 1.22e-09 | 6 |
posterior segment of eyeball | 1.22e-09 | 6 |
gland | 1.98e-08 | 59 |
pre-chordal neural plate | 4.28e-08 | 61 |
brain | 2.91e-07 | 68 |
future brain | 2.91e-07 | 68 |