FFCP PHASE1:Hg19::chr7:48039803..48039815,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=256979 | |EntrezGene=256979 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22429 | |HGNC=22429 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-25bp_to_ENST00000473723_5end | |||
|cluster_id=chr7:48039803..48039815,- | |||
|coexpression_cluster_id=C234 | |||
|description=CAGE_peak_3_at_SUN3_5end | |||
|id=chr7:48039803..48039815,- | |||
|ontology_enrichment_celltype=CL:0000039!1.02e-24!7;CL:0000586!1.02e-24!7;CL:0002541!6.57e-10!3 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.28e-17;7!CL:0000586;3.28e-17;7!CL:1000415;2.05e-15;2!CL:0002535;2.05e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.90e-17,7;CL:0000586,2.90e-17,7;CL:0002535,1.78e-15,2;CL:1000415,2.37e-15,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.74e-13!143;DOID:1749!2.72e-12!14;DOID:305!9.58e-10!106;DOID:6193!2.52e-08!1;DOID:178!4.40e-08!1;DOID:326!4.40e-08!1;DOID:3978!4.40e-08!1;DOID:3394!4.40e-08!1;DOID:5844!4.40e-08!1;DOID:3112!9.29e-08!1;DOID:3095!1.01e-07!22;DOID:2994!1.01e-07!22;DOID:7!1.38e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:6193;2.37e-29;1!DOID:1749;6.68e-19;14!DOID:3350;2.05e-15;2!DOID:4556;9.90e-11;3!DOID:3908;6.04e-07;5!DOID:4362;6.04e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,4.20e-29,1;DOID:1749,6.09e-19,14;DOID:3350,2.74e-15,2;DOID:4556,9.90e-11,3;DOID:0050687,6.71e-10,143;DOID:305,5.42e-07,106;DOID:4362,5.70e-07,5;DOID:3908,6.04e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002046!3.47e-12!5;UBERON:0004117!3.47e-12!5;UBERON:0007689!3.47e-12!5;UBERON:0007123!3.47e-12!5;UBERON:0003091!3.47e-12!5;UBERON:0000476!6.57e-10!3;UBERON:0000920!6.57e-10!3;UBERON:0002294!2.45e-09!7;UBERON:0001173!2.45e-09!7;UBERON:0004912!2.45e-09!7;UBERON:0000473!2.72e-08!8;UBERON:0001282!4.11e-08!1;UBERON:0009842!4.11e-08!1;UBERON:0003704!4.11e-08!1;UBERON:0001171!4.11e-08!1;UBERON:0001172!4.11e-08!1;UBERON:0003343!6.65e-08!4;UBERON:0004785!6.65e-08!4;UBERON:0002394!1.14e-07!4;UBERON:0003928!1.14e-07!4;UBERON:0008814!3.80e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;2.05e-15;2!UBERON:0004801;2.05e-15;2!UBERON:0002110;9.90e-11;3!UBERON:0003343;1.76e-08;4!UBERON:0004785;1.76e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.78e-15,2;UBERON:0004801,1.78e-15,2;UBERON:0002110,1.09e-10,3;UBERON:0006242,1.09e-10,3;UBERON:0003343,1.70e-08,4;UBERON:0004785,1.70e-08,4 | |||
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|short_description=p3@SUN3 | |||
}} | }} |
Latest revision as of 21:45, 18 September 2015
Short description: | p3@SUN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SUN3_5end |
Coexpression cluster: | C234_oral_epidermoid_malignant_cervical_ductal_lung_keratoacanthoma |
Association with transcript: | -25bp_to_ENST00000473723_5end |
EntrezGene: | SUN3 |
HGNC: | 22429 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.90e-17 | 7 |
germ cell | 2.90e-17 | 7 |
epithelial cell of cervix | 1.78e-15 | 2 |
epithelial cell of gall bladder | 2.37e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.78e-15 | 2 |
cervix epithelium | 1.78e-15 | 2 |
gallbladder | 1.09e-10 | 3 |
gall bladder primordium | 1.09e-10 | 3 |
mucosa of oral region | 1.70e-08 | 4 |
respiratory system mucosa | 1.70e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 4.20e-29 | 1 |
squamous cell carcinoma | 6.09e-19 | 14 |
mesenchymal cell neoplasm | 2.74e-15 | 2 |
lung large cell carcinoma | 9.90e-11 | 3 |
cell type cancer | 6.71e-10 | 143 |
carcinoma | 5.42e-07 | 106 |
cervical cancer | 5.70e-07 | 5 |
non-small cell lung carcinoma | 6.04e-07 | 5 |