FFCP PHASE1:Hg19::chrX:107335034..107335049,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=115201 | |EntrezGene=115201 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16489 | |HGNC=16489 | ||
|TSSclassifier=strong | |||
|UniProt=G5E979 | |UniProt=G5E979 | ||
|association_with_transcript=0bp_to_ENST00000343524_5end | |association_with_transcript=0bp_to_ENST00000343524_5end | ||
|cluster_id=chrX:107335034..107335049,+ | |||
|description=CAGE_peak_2_at_ATG4A_5end | |description=CAGE_peak_2_at_ATG4A_5end | ||
|id=chrX:107335034..107335049,+ | |id=chrX:107335034..107335049,+ | ||
|ontology_enrichment_celltype=CL:0002139!2.94e-07!24 | |ontology_enrichment_celltype=CL:0002139!2.94e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.22e-09;24!CL:0002618;1.53e-08;3!CL:0000115;3.66e-07;36!CL:0000071;6.97e-07;18!CL:0002543;7.99e-07;6 | |ontology_enrichment_celltype_v019=CL:0002139;1.22e-09;24!CL:0002618;1.53e-08;3!CL:0000115;3.66e-07;36!CL:0000071;6.97e-07;18!CL:0002543;7.99e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,6.10e-10,24;CL:0002618,1.81e-08,3;CL:0000115,3.22e-08,36;CL:0000071,3.70e-07,18;CL:0002546,3.70e-07,18;CL:0002543,5.13e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;6.97e-07;18 | |ontology_enrichment_development_v019=CL:0002546;6.97e-07;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.08e-11!115;UBERON:0000477!1.80e-09!286;UBERON:0004111!3.95e-08!241;UBERON:0001009!4.04e-08!113;UBERON:0004535!8.03e-08!110;UBERON:0000025!1.60e-07!194;UBERON:0001049!3.25e-07!57;UBERON:0005068!3.25e-07!57;UBERON:0006241!3.25e-07!57;UBERON:0007135!3.25e-07!57;UBERON:0002780!4.37e-07!41;UBERON:0001890!4.37e-07!41;UBERON:0006240!4.37e-07!41;UBERON:0002616!6.96e-07!59 | |ontology_enrichment_uberon=UBERON:0007023!4.08e-11!115;UBERON:0000477!1.80e-09!286;UBERON:0004111!3.95e-08!241;UBERON:0001009!4.04e-08!113;UBERON:0004535!8.03e-08!110;UBERON:0000025!1.60e-07!194;UBERON:0001049!3.25e-07!57;UBERON:0005068!3.25e-07!57;UBERON:0006241!3.25e-07!57;UBERON:0007135!3.25e-07!57;UBERON:0002780!4.37e-07!41;UBERON:0001890!4.37e-07!41;UBERON:0006240!4.37e-07!41;UBERON:0002616!6.96e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0003296;2.74e-09;4!UBERON:0010133;2.74e-09;4!UBERON:0004638;6.97e-07;18!UBERON:0001986;6.97e-07;18!UBERON:0004852;6.97e-07;18 | |ontology_enrichment_uberon_v019=UBERON:0003296;2.74e-09;4!UBERON:0010133;2.74e-09;4!UBERON:0004638;6.97e-07;18!UBERON:0001986;6.97e-07;18!UBERON:0004852;6.97e-07;18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,8.79e-10,112;UBERON:0003296,1.08e-09,4;UBERON:0010133,1.08e-09,4;UBERON:0004535,2.15e-09,109;UBERON:0000055,3.02e-07,68;UBERON:0004638,3.70e-07,18;UBERON:0001986,3.70e-07,18;UBERON:0004852,3.70e-07,18 | |||
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|phase1_expression=0.726713517082227,0.642301571672949,0.704772020479856,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0.672325146451775,1.20538905604795,1.46062018077475,0.487932798790507,0.246242116153576,0,0,0.572471974262113,0.958120975510189,0.753255837568817,0.152826811495903,0.246301768349837,0.236132343941038,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0.369754010166788,0.387336002901508,0.710846162437108,0,0,0.200544447470142,0.217010870715852,0.671746422719773,0.647787332037959,0,0.290796477559129,0,0.727752183563449,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0.545812300115692,0.224723484445085,0,0,1.27867425159808,0.329851300186716,0,0,0.290209238628584,1.13477044938228,0,0,0,0.217188844705117,0.605399502633369,0,0.316462387440884,0.422510572623884,0,0.628975936525128,0.44931452458598,0.150176892841506,0.16072558669708,0,0,0,1.75996244461323,0,0,0,0.400395987036012,0,0,0,0,0,0,0,1.12101712596307,0,0.786839080455332,0,0,0,0,0.473447805734733,0,0.557052284425868,0.294605907474837,0,0,0.384273959177026,0.130059347559878,0,0.552700035571697,0,0.444859689486181,0,0,0.339928028092699,0.766440987203842,0,0.253019692019503,0,0,0,0.150575119077773,0.383959833463255,2.49861453104692,0.236777252044017,1.64225599384209,0,0,0.289648807765598,0,0.670700859703636,0,0,0.50133791063589,0,0,0,0.756278537312543,0.221729397462564,0.702678285545008,0.458426764241994,0,0,0.324547393654683,0.174129737299267,0.398873881556595,0.715471872916026,1.71598473234038,0.371457501329565,0.596287222100115,0,1.38856200643038,0.56530794192401,1.25849830862972,1.6507082516404,0.626984899610432,2.58416759169329,4.62496141492723,4.68608857870538,0.805658634218294,0.760272105718513,0.488124115096339,1.47065232138347,0.81014194788176,4.46498641420399,2.2452937262617,3.94140181691628,0,0.949265659568129,1.83201743930407,0,0,0.436094052142534,0.496971951695318,0.506522046658319,0.529636723252875,0,1.41867352879343,0.560677600142307,1.06748995729705,0.24666754841716,0.622422070799533,0.67355336034844,0.980771418680752,0.302714855289863,0,0,0,1.1409436430889,0,0.117434498643765,0,0.140450806702248,0.204154171254893,0.737005903870608,0.206651562351531,0,0,0,0,0.336672227908132,0.125118519871964,1.38532057742091,0.438977620880838,0.30648779579902,0.300476117813194,0.794025282120147,0.179389635688862,0.213557388818567,0.635795703478686,0.300091096084402,0.206105058476878,0.515281080091258,0.37223371266318,0.675105328965065,0.68205903612839,1.00973509697646,0.552299391853796,0.969876340912871,0,0.10075209822764,0.169560592310488,0.773043412653187,1.63647672354501,1.14721838155602,0.487894824518382,0,0.116193942869518,1.14027160516907,0.504641701751257,0,0,0,0,0,0,0.473227200159376,0.842923450390509,0.723033089650446,0.220587945464788,0.435758888184812,0.474541238222193,0.674156540800822,0,0.38474715694639,0.738155454624648,0,0,0,0,0.982827216677626,0.590789906681404,0,0.737930631258681,0.171567810298526,0.658501712451753,0,0.502644862058154,0.370353780634118,0,0,0,0.579652024875384,0.117408694235822,0.288732895522148,0,0.570762456703795,0,0,0.738651018262192,1.17002132569619,0.297262324577456,0.93733833986777,1.51183915378974,1.98485136139341,0.358234090811393,0.581267877027924,0,2.46331618947972,0.264145302039678,0,0.432359860250884,0.12624243342638,0.190493682876507,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0.857479297891735,0.224262168690721,0,0.22001485746285,0.387815147273333,0,0,0.531876233169741,0,0,0,0,0.285955987316295,0.542621605391443,0,0.65147236858747,0.355391948742546,0,1.80863626235752,1.74306691720059,1.09970290300263,0,0.502257091432126,0,0.479249710983165,1.14861935834114,0,0.434343920002738,0.205476322550383,0.716243852959582,0.224170287987055,0,0.215627574859517,0.256686072559497,0.508189248444927,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0,0.315404830067869,0.234282829985426,0,0,0,0,0.184369168541703,0.781952530212746,0.587403472388222,0,0,0,0,0,0,0,0.992431231275107,0.460385919864187,1.12264037773229,0.768834895534206,0,0.321707842287215,0,0.308419387605311,0.355123450626254,0.328508624055237,1.55776328755086,0.232420756919918,0.120859449591622,0.802025881213139,0.184161977871793,0.68888668898764,0,0,0,0.15403067420883,0,0,0.316654886678627,2.27466768141793,1.19065593693561,0.215915916102139,0,0,0.501689773854853,0.254876273045038,0,0,2.41185864310528,2.61435451024901,0.256450125116389,0,0,0.618246069886334,0.183138929636687,0.247528499761764,0.574265537996172,0.650060246036521,0,0.48335359146061,0.154048617114644,0.460511024178389,0.137836572484531,1.28904293841928,0,0.255679882248303,0.0890320356467374,0.826424576804891,0.192190067365106,1.65896526242959,0.6069466851333,0,0,1.3940745403212,0.924100740528266,0.532306030317022,0,1.11194531462352,0.715624433709956,1.48863347743867,0,0.571890581771475,0,0,0,0,0.539617372749944,0.274537029736055,0.117812402345686,0.202182481573316,1.58510321173008,0.421258456238981,0.48763373908959,0.2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| ||
|short_description=p2@ATG4A | |short_description=p2@ATG4A | ||
}} | }} |
Latest revision as of 23:19, 18 September 2015
Short description: | p2@ATG4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ATG4A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000343524_5end |
EntrezGene: | ATG4A |
HGNC: | 16489 |
UniProt: | G5E979 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.10e-10 | 24 |
endothelial cell of umbilical vein | 1.81e-08 | 3 |
endothelial cell | 3.22e-08 | 36 |
blood vessel endothelial cell | 3.70e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.70e-07 | 18 |
vein endothelial cell | 5.13e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
circulatory system | 8.79e-10 | 112 |
gland of diencephalon | 1.08e-09 | 4 |
neuroendocrine gland | 1.08e-09 | 4 |
cardiovascular system | 2.15e-09 | 109 |
vessel | 3.02e-07 | 68 |
blood vessel endothelium | 3.70e-07 | 18 |
endothelium | 3.70e-07 | 18 |
cardiovascular system endothelium | 3.70e-07 | 18 |