FFCP PHASE1:Hg19::chr11:63439013..63439091,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:63439013..63439091,- to FFCP PHASE1:Hg19::chr11:63439013..63439091,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25923 | |EntrezGene=25923 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24526 | |HGNC=24526 | ||
|TSSclassifier=strong | |||
|UniProt=Q6DD88 | |UniProt=Q6DD88 | ||
|association_with_transcript=0bp_to_ENST00000398868,NM_015459,uc001nxk.1_5end | |||
|cluster_id=chr11:63439013..63439091,- | |||
|description=CAGE_peak_2_at_ATL3_5end | |||
|id=chr11:63439013..63439091,- | |||
|ontology_enrichment_celltype=CL:0000066!2.60e-15!254;CL:0002076!1.51e-07!43 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.87e-15,253;CL:0002076,2.92e-08,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.66e-23!235;DOID:14566!1.82e-22!239;DOID:0050687!1.54e-16!143;DOID:305!2.47e-12!106;DOID:0050686!1.20e-11!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.40e-23,235;DOID:14566,1.54e-22,239;DOID:0050687,1.34e-16,143;DOID:305,2.28e-12,106;DOID:0050686,1.14e-11,137 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.05e-08!169;UBERON:0000925!3.05e-08!169;UBERON:0006595!3.05e-08!169;UBERON:0001007!5.29e-07!155;UBERON:0001555!5.29e-07!155;UBERON:0007026!5.29e-07!155 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.34e-08,160;UBERON:0000925,1.34e-08,160;UBERON:0006595,1.34e-08,160;UBERON:0001007,4.11e-07,145;UBERON:0001555,4.11e-07,145;UBERON:0007026,4.11e-07,145 | |||
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| ||
|short_description=p2@ATL3 | |||
}} | }} |
Latest revision as of 23:58, 18 September 2015
Short description: | p2@ATL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ATL3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000398868, NM_015459, uc001nxk.1_5end |
EntrezGene: | ATL3 |
HGNC: | 24526 |
UniProt: | Q6DD88 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.87e-15 | 253 |
endo-epithelial cell | 2.92e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.34e-08 | 160 |
endoderm | 1.34e-08 | 160 |
presumptive endoderm | 1.34e-08 | 160 |
digestive system | 4.11e-07 | 145 |
digestive tract | 4.11e-07 | 145 |
primitive gut | 4.11e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.40e-23 | 235 |
disease of cellular proliferation | 1.54e-22 | 239 |
cell type cancer | 1.34e-16 | 143 |
carcinoma | 2.28e-12 | 106 |
organ system cancer | 1.14e-11 | 137 |