FFCP PHASE1:Hg19::chrX:108779021..108779067,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55916 | |EntrezGene=55916 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18151 | |HGNC=18151 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPJ8 | |UniProt=Q9NPJ8 | ||
|association_with_transcript=11bp_to_ENST00000218004,NM_018698,uc004eoe.1_5end | |association_with_transcript=11bp_to_ENST00000218004,NM_018698,uc004eoe.1_5end | ||
|cluster_id=chrX:108779021..108779067,+ | |||
|description=CAGE_peak_3_at_NXT2_5end | |description=CAGE_peak_3_at_NXT2_5end | ||
|id=chrX:108779021..108779067,+ | |id=chrX:108779021..108779067,+ | ||
|ontology_enrichment_celltype=CL:0002322!3.52e-07!5 | |ontology_enrichment_celltype=CL:0002322!3.52e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000054;9.62e-10;2!CL:0000137;9.62e-10;2!CL:0000092;9.62e-10;2!CL:0002573;4.67e-07;2!CL:0002149;6.42e-07;6!CL:0002255;6.42e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,1.01e-09,2;CL:0000137,1.01e-09,2;CL:0000092,1.01e-09,2;CL:0002573,4.60e-07,2;CL:0002149,6.16e-07,6;CL:0002255,6.16e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;2.31e-10;2!DOID:200;9.62e-10;2!DOID:4305;9.62e-10;2!DOID:1115;2.88e-07;20!DOID:201;4.27e-07;6!DOID:0060100;4.27e-07;6!DOID:3001;6.42e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.31e-10,2;DOID:200,1.01e-09,2;DOID:4305,1.01e-09,2;DOID:14566,9.13e-08,239;DOID:1115,3.10e-07,20;DOID:201,4.32e-07,6;DOID:0060100,4.32e-07,6;DOID:3001,6.16e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000995;1.56e-08;17!UBERON:0003975;5.02e-08;18!UBERON:0004175;8.63e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005156,1.56e-09,59;UBERON:0000990,1.56e-09,59;UBERON:0000995,4.40e-09,21;UBERON:0005795,1.26e-08,22;UBERON:0003975,1.26e-08,22;UBERON:0004175,1.77e-07,25 | |||
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| ||
|short_description=p3@NXT2 | |short_description=p3@NXT2 | ||
}} | }} |
Latest revision as of 00:18, 19 September 2015
Short description: | p3@NXT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NXT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENST00000218004, NM_018698, uc004eoe.1_5end |
EntrezGene: | NXT2 |
HGNC: | 18151 |
UniProt: | Q9NPJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 1.01e-09 | 2 |
osteocyte | 1.01e-09 | 2 |
osteoclast | 1.01e-09 | 2 |
Schwann cell | 4.60e-07 | 2 |
epithelial cell of uterus | 6.16e-07 | 6 |
stromal cell of endometrium | 6.16e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
reproductive structure | 1.56e-09 | 59 |
reproductive system | 1.56e-09 | 59 |
uterus | 4.40e-09 | 21 |
embryonic uterus | 1.26e-08 | 22 |
internal female genitalia | 1.26e-08 | 22 |
internal genitalia | 1.77e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.31e-10 | 2 |
giant cell tumor | 1.01e-09 | 2 |
bone giant cell tumor | 1.01e-09 | 2 |
disease of cellular proliferation | 9.13e-08 | 239 |
sarcoma | 3.10e-07 | 20 |
connective tissue cancer | 4.32e-07 | 6 |
musculoskeletal system cancer | 4.32e-07 | 6 |
female reproductive endometrioid cancer | 6.16e-07 | 6 |