FFCP PHASE1:Hg19::chr3:52713780..52713784,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55193 | |EntrezGene=55193 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30064 | |HGNC=30064 | ||
|TSSclassifier=strong | |||
|UniProt=Q86U86 | |UniProt=Q86U86 | ||
|association_with_transcript=-41bp_to_NM_018165,NM_181042,uc003deq.2,uc003der.2,uc003des.2,uc003det.2,uc003deu.2,uc003dev.2,uc003dew.2,uc003dex.2,uc003dez.1,uc010hmk.1_5end | |association_with_transcript=-41bp_to_NM_018165,NM_181042,uc003deq.2,uc003der.2,uc003des.2,uc003det.2,uc003deu.2,uc003dev.2,uc003dew.2,uc003dex.2,uc003dez.1,uc010hmk.1_5end | ||
|cluster_id=chr3:52713780..52713784,- | |||
|coexpression_cluster_id=C110 | |||
|description=CAGE_peak_18_at_PBRM1_5end | |description=CAGE_peak_18_at_PBRM1_5end | ||
|id=chr3:52713780..52713784,- | |id=chr3:52713780..52713784,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1036;5.22e-26;8!DOID:8692;4.53e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,5.22e-26,8;DOID:8692,7.41e-08,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p18@PBRM1 | |short_description=p18@PBRM1 | ||
}} | }} |
Latest revision as of 00:31, 19 September 2015
Short description: | p18@PBRM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_PBRM1_5end |
Coexpression cluster: | C110_leukemia_chronic_Eosinophils_acute_Whole_CD34_Lymphatic |
Association with transcript: | -41bp_to_NM_018165, NM_181042, uc003deq.2, uc003der.2, uc003des.2, uc003det.2, uc003deu.2, uc003dev.2, uc003dew.2, uc003dex.2, uc003dez.1, uc010hmk.1_5end |
EntrezGene: | PBRM1 |
HGNC: | 30064 |
UniProt: | Q86U86 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 5.22e-26 | 8 |
myeloid leukemia | 7.41e-08 | 31 |